RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CHCHD5Q9BSY4 110 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
HTT-202ENST00000502820 IGKV3-7A0A075B6H7 116 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 DEFB131BA0A096LNP1 70 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 IGHV3-21A0A0B4J1V1 117 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 IGHV1-58A0A0C4DH39 117 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 TRBV10-3A0A0K0K1G6 114 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 SMR3BP02814 79 aaPredicted RBP3.67□□□□□ -1.82
HTT-202ENST00000502820 ODF3L2Q3SX64 289 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 FAM19A4Q96LR4 140 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 U3KQE9 123 aa3.67□□□□□ -1.82
HTT-202ENST00000502820 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 F8WDY8 70 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 GAS8-AS1O95177 125 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 DNAL4O96015 105 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 TSHBP01222 138 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 MGPP08493 103 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 HTN3P15516 51 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 MALP21145 153 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 FUSP35637 526 aaKnown RBP eCLIP3.66□□□□□ -1.82
HTT-202ENST00000502820 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 KIR2DL5BQ8NHK3 375 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 LITAFQ99732 161 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 MAP6D1Q9H9H5 199 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 C11orf21Q9P2W6 132 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 PLA2G2DQ9UNK4 145 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 KIF25-AS1Q9Y6Z4 181 aa3.66□□□□□ -1.82
HTT-202ENST00000502820 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 hADV29S1A0JD25 119 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 F5H768 121 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 I3L3M4 83 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 IGHV3-30-3P0DP02 117 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 ZFAND2AQ8N6M9 145 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 DPH3Q96FX2 82 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 C16orf92Q96LL3 132 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 RHPN1-AS1Q9BWJ2 59 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.83
HTT-202ENST00000502820 IGLV5-45A0A087WSX0 123 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 TRAV13-1A0A0B4J241 112 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 IGHV4-28A0A0C4DH34 117 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 KLLNB2CW77 178 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 H0YGX0 51 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 FAM229AH3BQW9 127 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 NDUFC1O43677 76 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 TIRAPP58753 221 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 LINC00315P59091 139 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 NPC2P61916 151 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 HAMPP81172 84 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 ANXA2RQ3ZCQ2 193 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 SERTAD4-AS1Q5TG53 156 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 C14orf178Q8N769 122 aaPredicted RBP3.64□□□□□ -1.83
HTT-202ENST00000502820 RPL39LQ96EH5 51 aaKnown RBP3.64□□□□□ -1.83
HTT-202ENST00000502820 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
HTT-202ENST00000502820 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
HTT-202ENST00000502820 PKD1P98161 4303 aa3.64□□□□□ -1.83
HTT-202ENST00000502820 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 IGHV3-49A0A0A0MS15 119 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 TRAV8-3A0A0A6YYJ7 113 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 PRAC2D3DTV9 90 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 H3BQ85 93 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 EIF4EBP3O60516 100 aaPredicted RBP3.63□□□□□ -1.83
HTT-202ENST00000502820 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
HTT-202ENST00000502820 KRTAP10-2P60368 255 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 SUMO4Q6EEV6 95 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 Q6ZR54 194 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 C6orf223Q8N319 242 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 C9orf85Q96MD7 179 aa3.63□□□□□ -1.83
HTT-202ENST00000502820 IGHV3OR16-13A0A075B7E8 117 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 IGHV3-74A0A0B4J1X5 117 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 IGHV3-66A0A0C4DH42 116 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 JMJD7-PLA2G4BH0Y9G9 81 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 H7C2G1 150 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 K7EQG2 157 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 SOCS3O14543 225 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 PRSS2P07478 247 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 RPL28P46779 137 aaKnown RBP3.62□□□□□ -1.83
HTT-202ENST00000502820 CMC4P56277 68 aaPredicted RBP3.62□□□□□ -1.83
HTT-202ENST00000502820 DAZ2Q13117 558 aaKnown RBP3.62□□□□□ -1.83
HTT-202ENST00000502820 DAZ4Q86SG3 579 aaKnown RBP3.62□□□□□ -1.83
HTT-202ENST00000502820 OBSCN-AS1Q96MR7 158 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 UPK3BQ9BT76 320 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 DAZ3Q9NR90 486 aaKnown RBP3.62□□□□□ -1.83
HTT-202ENST00000502820 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
HTT-202ENST00000502820 M0QY20 66 aa3.61□□□□□ -1.83
HTT-202ENST00000502820 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
HTT-202ENST00000502820 BAALC-AS2P0C853 105 aa3.61□□□□□ -1.83
HTT-202ENST00000502820 DEFB131AP59861 70 aa3.61□□□□□ -1.83
HTT-202ENST00000502820 RPL11P62913 178 aaKnown RBP3.61□□□□□ -1.83
HTT-202ENST00000502820 Q6ZSN1 163 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms