RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SCGB1D1O95968 90 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
USP46-203ENST00000502443 PMVKQ15126 192 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 LINC00528Q8N1L1 170 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 CDKN2A-AS1Q9UH64 79 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 HSPB8Q9UJY1 196 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 PKIGQ9Y2B9 76 aa4.66□□□□□ -1.66
USP46-203ENST00000502443 A0A087WYN8 130 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 A0A096LNI7 61 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 TINCRA0A1B0GVN0 87 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 F8WDY8 70 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 SYS1-DBNDD2H3BUS1 97 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 NDUFA1O15239 70 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 ATP5LO75964 103 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 MAJINQ3KP22 176 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 UNQ6190/PRO20217Q6UXQ8 127 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 LINC00469Q8N7U9 141 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 TOMM7Q9P0U1 55 aa4.65□□□□□ -1.67
USP46-203ENST00000502443 LOC107984640A0A0U1RRK4 108 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 PLA2G1BP04054 148 aaKnown RBP4.64□□□□□ -1.67
USP46-203ENST00000502443 PRSS2P07478 247 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 GAGE2BQ13066 116 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 KIAA0087Q14695 138 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 RNF151Q2KHN1 245 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 C10orf25Q5T742 122 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 MAP1LC3CQ9BXW4 147 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 MRPL35Q9NZE8 188 aaKnown RBP4.64□□□□□ -1.67
USP46-203ENST00000502443 LINC00474Q9P2X8 69 aa4.64□□□□□ -1.67
USP46-203ENST00000502443 PTTG1IPP53801 180 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 CKS1BP61024 79 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 RPL18AQ02543 176 aaKnown RBP4.63□□□□□ -1.67
USP46-203ENST00000502443 LINC01545Q5VT33 79 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 Q8IZM0 81 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 STPG4Q8N801 248 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
USP46-203ENST00000502443 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 TRBV30A0A0K0K1B3 111 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 SMIM1B2RUZ4 78 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 H3BRM9 83 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 SPINK8P0C7L1 97 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 INAFM2P0DMQ5 153 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 PLAC8Q9NZF1 115 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
USP46-203ENST00000502443 RPL37AP61513 92 aaKnown RBP4.61□□□□□ -1.67
USP46-203ENST00000502443 ODF1Q14990 250 aa4.61□□□□□ -1.67
USP46-203ENST00000502443 C9orf116Q5BN46 136 aaPredicted RBP4.61□□□□□ -1.67
USP46-203ENST00000502443 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
USP46-203ENST00000502443 PMCHL2Q9BQD1 86 aa4.61□□□□□ -1.67
USP46-203ENST00000502443 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
USP46-203ENST00000502443 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
USP46-203ENST00000502443 C20orf202A1L168 122 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 C11orf86A6NJI1 115 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 F8VRH5 84 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 H0Y8G0 127 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 TLX1NBP0CAT3 122 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 ZNF22P17026 224 aaPredicted RBP4.6□□□□□ -1.67
USP46-203ENST00000502443 CXCL5P42830 114 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 S100A12P80511 92 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 GAGE2EQ4V326 116 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 Q6ZRP5 223 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 COX7B2Q8TF08 81 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 PRO1933Q9H354 126 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
USP46-203ENST00000502443 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
USP46-203ENST00000502443 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
USP46-203ENST00000502443 VAMP8Q9BV40 100 aa4.59□□□□□ -1.67
USP46-203ENST00000502443 IGLV5-39A0A0G2JS06 123 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 A0A1W2PNN7 141 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 PCP4L1A6NKN8 68 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
USP46-203ENST00000502443 SPATA45Q537H7 98 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 VPS13BQ7Z7G8 4022 aa4.58□□□□□ -1.68
USP46-203ENST00000502443 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
USP46-203ENST00000502443 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
USP46-203ENST00000502443 FAT1Q14517 4588 aa4.57□□□□□ -1.68
USP46-203ENST00000502443 FAM168BA1KXE4 195 aa4.57□□□□□ -1.68
USP46-203ENST00000502443 DPM2O94777 84 aa4.57□□□□□ -1.68
USP46-203ENST00000502443 TMEM223A0PJW6 202 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 LINC00587B1AMM8 73 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 TSTD3H0UI37 97 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 IGKCP01834 107 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 ANKRD39Q53RE8 183 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 C9orf129Q5T035 196 aaKnown RBP4.56□□□□□ -1.68
USP46-203ENST00000502443 PHF5AQ7RTV0 110 aaKnown RBP4.56□□□□□ -1.68
USP46-203ENST00000502443 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
USP46-203ENST00000502443 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
USP46-203ENST00000502443 PFN2P35080 140 aa4.55□□□□□ -1.68
USP46-203ENST00000502443 HNRNPA3P51991 378 aaKnown RBP4.55□□□□□ -1.68
USP46-203ENST00000502443 PRR3P79522 188 aaKnown RBP4.55□□□□□ -1.68
USP46-203ENST00000502443 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms