RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
SH3RF1-202ENST00000502315 ZNF861PO60384 105 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 SEC11AP67812 179 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 KIAA0087Q14695 138 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 ATP5L2Q7Z4Y8 100 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
SH3RF1-202ENST00000502315 IFITM10A6NMD0 228 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 GHRHP01286 108 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 S100PP25815 95 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 PAPPA-AS1Q5QFB9 102 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 Q6ZN92 141 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 ORMDL3Q8N138 153 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 FAM104AQ969W3 186 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
SH3RF1-202ENST00000502315 A0A1B0GXF2 115 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 SMKR1H3BMG3 65 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 M0QXV9 152 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 RPL39P62891 51 aaKnown RBP4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 UBE2BP63146 152 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 RNASE13Q5GAN3 156 aaKnown RBP4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 TEX43Q6ZNM6 134 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
SH3RF1-202ENST00000502315 D6R8Y8 96 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 TRGC2P03986 189 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 PRSS2P07478 247 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 CXCL5P42830 114 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 MRPL54Q6P161 138 aaKnown RBP4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 Q8IZM0 81 aa4.28□□□□□ -1.72
SH3RF1-202ENST00000502315 LPAP08519 4548 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 IGLV4-3A0A075B6K6 122 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 RPL28P46779 137 aaKnown RBP4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 RAB5BP61020 215 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 CKS1BP61024 79 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 HERVK_113P63121 156 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 C6orf226Q5I0X4 101 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 AMELXQ99217 191 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 VCX2Q9H322 139 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 CYSLTR1Q9Y271 337 aa4.27□□□□□ -1.73
SH3RF1-202ENST00000502315 TRAV9-1A0A075B6T8 112 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 FAM168BA1KXE4 195 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 NPYP01303 97 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 CRYGAP11844 174 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 PRR4Q16378 134 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 C2orf66Q6UXQ4 117 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 PRELID3AQ96N28 172 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 MAP1LC3AQ9H492 121 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
SH3RF1-202ENST00000502315 LOC105371267A0A1B0GV96 52 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 F8VRH5 84 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 BCE1O60756 84 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BOP23527 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BBP33778 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BDP58876 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BCP62807 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 FABP9Q0Z7S8 132 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST2H2BEQ16778 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 Q8N8P6 123 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BHQ93079 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BNQ99877 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 HIST1H2BMQ99879 126 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 ALKBH7Q9BT30 221 aaPredicted RBP4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 NXT2Q9NPJ8 142 aaKnown RBP4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 TRAPPC1Q9Y5R8 145 aa4.25□□□□□ -1.73
SH3RF1-202ENST00000502315 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 KIAA1644Q3SXP7 199 aa4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 MRPL55Q7Z7F7 128 aaKnown RBP4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
SH3RF1-202ENST00000502315 MUC2Q02817 5179 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 NDUFA6P56556 154 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 PDZD11Q5EBL8 140 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 C2orf82Q6UX34 121 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 GNB1LQ9BYB4 327 aa4.23□□□□□ -1.73
SH3RF1-202ENST00000502315 COX19Q49B96 90 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 329.6 ms