RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 NREPQ16612 68 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 FAM74A4Q5TZK3 123 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 LINC00304Q8N9R0 145 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 TMEM167AQ8TBQ9 72 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 C14orf132Q9NPU4 83 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 PLXNB1O43157 2135 aa4.34□□□□□ -1.71
SNX13-212ENST00000498463 COL4A5P29400 1685 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 TRAV21A0A0B4J279 112 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 TRBV6-5A0A0K0K1A5 114 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 H3BRN7 92 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 CRPP02741 224 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 DEFB132Q7Z7B7 95 aa4.33□□□□□ -1.72
SNX13-212ENST00000498463 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
SNX13-212ENST00000498463 CHKB-CPT1BH3BT56 60 aa4.32□□□□□ -1.72
SNX13-212ENST00000498463 IGKV1-16P04430 117 aa4.32□□□□□ -1.72
SNX13-212ENST00000498463 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
SNX13-212ENST00000498463 UTRNP46939 3433 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 IGKV3D-11A0A0A0MRZ8 115 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 SAA2P0DJI9 122 aaPredicted RBP4.31□□□□□ -1.72
SNX13-212ENST00000498463 SPTSSBQ8NFR3 76 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 CCL4L1Q8NHW4 92 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
SNX13-212ENST00000498463 MUC22E2RYF6 1773 aaPredicted RBP4.3□□□□□ -1.72
SNX13-212ENST00000498463 POLR2KP53803 58 aaKnown RBP4.3□□□□□ -1.72
SNX13-212ENST00000498463 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
SNX13-212ENST00000498463 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
SNX13-212ENST00000498463 CCL26Q9Y258 94 aa4.3□□□□□ -1.72
SNX13-212ENST00000498463 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
SNX13-212ENST00000498463 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
SNX13-212ENST00000498463 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
SNX13-212ENST00000498463 SPAG17Q6Q759 2223 aa4.29□□□□□ -1.72
SNX13-212ENST00000498463 IGHV3-64A0A075B6Q5 118 aa4.28□□□□□ -1.72
SNX13-212ENST00000498463 IGFL3Q6UXB1 125 aa4.28□□□□□ -1.72
SNX13-212ENST00000498463 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 C5orf67F2Z3F1 127 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 RPL39P5Q59GN2 51 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 Q5VV11 94 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 MED12Q93074 2177 aa4.27□□□□□ -1.73
SNX13-212ENST00000498463 DEFB108AA8MXU0 73 aa4.26□□□□□ -1.73
SNX13-212ENST00000498463 CD52P31358 61 aa4.26□□□□□ -1.73
SNX13-212ENST00000498463 HAMPP81172 84 aa4.26□□□□□ -1.73
SNX13-212ENST00000498463 ZNF625Q96I27 306 aaPredicted RBP4.26□□□□□ -1.73
SNX13-212ENST00000498463 Q9BRP9 147 aa4.26□□□□□ -1.73
SNX13-212ENST00000498463 MRPL33O75394 65 aaKnown RBP4.25□□□□□ -1.73
SNX13-212ENST00000498463 IGKV1-17P01599 117 aa4.25□□□□□ -1.73
SNX13-212ENST00000498463 MGPP08493 103 aa4.25□□□□□ -1.73
SNX13-212ENST00000498463 WT1-ASQ06250 92 aa4.25□□□□□ -1.73
SNX13-212ENST00000498463 INTS1Q8N201 2190 aaKnown RBP4.25□□□□□ -1.73
SNX13-212ENST00000498463 ALPK2Q86TB3 2170 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 LCE6AA0A183 80 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 NCR3O14931 201 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 LINC00467Q9BRT7 94 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
SNX13-212ENST00000498463 USF3Q68DE3 2245 aa4.23□□□□□ -1.73
SNX13-212ENST00000498463 IGKV2-40A0A087WW87 121 aaPredicted RBP4.23□□□□□ -1.73
SNX13-212ENST00000498463 IGKV2D-40P01614 121 aaPredicted RBP4.23□□□□□ -1.73
SNX13-212ENST00000498463 P0C880 135 aa4.23□□□□□ -1.73
SNX13-212ENST00000498463 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
SNX13-212ENST00000498463 RETNLBQ9BQ08 111 aa4.23□□□□□ -1.73
SNX13-212ENST00000498463 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
SNX13-212ENST00000498463 Q6ZQT0 140 aa4.22□□□□□ -1.73
SNX13-212ENST00000498463 UNC13CQ8NB66 2214 aa4.22□□□□□ -1.73
SNX13-212ENST00000498463 I3L2K1 104 aa4.21□□□□□ -1.74
SNX13-212ENST00000498463 WFDC9Q8NEX5 89 aa4.21□□□□□ -1.74
SNX13-212ENST00000498463 RPL39LQ96EH5 51 aaKnown RBP4.21□□□□□ -1.74
SNX13-212ENST00000498463 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
SNX13-212ENST00000498463 A0A1W2PNU3 283 aaPredicted RBP4.2□□□□□ -1.74
SNX13-212ENST00000498463 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
SNX13-212ENST00000498463 KLK9Q9UKQ9 250 aa4.2□□□□□ -1.74
SNX13-212ENST00000498463 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
SNX13-212ENST00000498463 HCP5Q6MZN7 132 aa4.19□□□□□ -1.74
SNX13-212ENST00000498463 Q8N814 137 aa4.19□□□□□ -1.74
SNX13-212ENST00000498463 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SNX13-212ENST00000498463 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
SNX13-212ENST00000498463 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
SNX13-212ENST00000498463 DEFB110Q30KQ9 67 aa4.18□□□□□ -1.74
SNX13-212ENST00000498463 Q8TAT8 98 aa4.18□□□□□ -1.74
SNX13-212ENST00000498463 ARFGEF3Q5TH69 2177 aa4.18□□□□□ -1.74
SNX13-212ENST00000498463 ESPL1Q14674 2120 aa4.18□□□□□ -1.74
SNX13-212ENST00000498463 ETDCA0A1B0GVM5 59 aa4.17□□□□□ -1.74
SNX13-212ENST00000498463 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
SNX13-212ENST00000498463 SDK2Q58EX2 2172 aa4.17□□□□□ -1.74
SNX13-212ENST00000498463 FREM1Q5H8C1 2179 aa4.17□□□□□ -1.74
SNX13-212ENST00000498463 CUL9Q8IWT3 2517 aa4.16□□□□□ -1.74
SNX13-212ENST00000498463 PCNX2A6NKB5 2137 aa4.15□□□□□ -1.74
SNX13-212ENST00000498463 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.75
SNX13-212ENST00000498463 Q6ZTI0 123 aa4.15□□□□□ -1.75
SNX13-212ENST00000498463 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
SNX13-212ENST00000498463 KNTC1P50748 2209 aa4.15□□□□□ -1.75
SNX13-212ENST00000498463 DIDO1Q9BTC0 2240 aaKnown RBP4.15□□□□□ -1.75
SNX13-212ENST00000498463 IGLV3-9A0A075B6K5 115 aa4.14□□□□□ -1.75
SNX13-212ENST00000498463 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
SNX13-212ENST00000498463 K7EIM0 57 aa4.14□□□□□ -1.75
SNX13-212ENST00000498463 M0QY20 66 aa4.14□□□□□ -1.75
SNX13-212ENST00000498463 WFDC10AQ9H1F0 79 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms