RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
PRKCB-209ENST00000498058 IGKV2-24A0A0C4DH68 120 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 H0Y8G0 127 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 FOXI1Q12951 378 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
PRKCB-209ENST00000498058 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
PRKCB-209ENST00000498058 TINCRA0A1B0GVN0 87 aa11.62□□□□□ -0.55
PRKCB-209ENST00000498058 ODF1Q14990 250 aa11.62□□□□□ -0.55
PRKCB-209ENST00000498058 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
PRKCB-209ENST00000498058 A0A096LNI7 61 aa11.61□□□□□ -0.55
PRKCB-209ENST00000498058 SYS1-DBNDD2H3BUS1 97 aa11.61□□□□□ -0.55
PRKCB-209ENST00000498058 KRTDAPP60985 99 aa11.61□□□□□ -0.55
PRKCB-209ENST00000498058 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
PRKCB-209ENST00000498058 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
PRKCB-209ENST00000498058 A0A0J9YXV3 536 aa11.6□□□□□ -0.55
PRKCB-209ENST00000498058 C20orf202A1L168 122 aa11.6□□□□□ -0.55
PRKCB-209ENST00000498058 F8VRH5 84 aa11.6□□□□□ -0.55
PRKCB-209ENST00000498058 COX7A2LO14548 114 aa11.6□□□□□ -0.55
PRKCB-209ENST00000498058 IGLC3P0DOY3 106 aa11.6□□□□□ -0.55
PRKCB-209ENST00000498058 LRP2P98164 4655 aa11.59□□□□□ -0.55
PRKCB-209ENST00000498058 MALP21145 153 aa11.59□□□□□ -0.55
PRKCB-209ENST00000498058 AKR1D1P51857 326 aa11.59□□□□□ -0.55
PRKCB-209ENST00000498058 STPG4Q8N801 248 aa11.59□□□□□ -0.55
PRKCB-209ENST00000498058 H3BRM9 83 aa11.58□□□□□ -0.56
PRKCB-209ENST00000498058 C3orf79P0CE67 100 aa11.58□□□□□ -0.56
PRKCB-209ENST00000498058 PLNP26678 52 aa11.58□□□□□ -0.56
PRKCB-209ENST00000498058 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
PRKCB-209ENST00000498058 LINC00469Q8N7U9 141 aa11.58□□□□□ -0.56
PRKCB-209ENST00000498058 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
PRKCB-209ENST00000498058 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
PRKCB-209ENST00000498058 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
PRKCB-209ENST00000498058 APOMO95445 188 aa11.57□□□□□ -0.56
PRKCB-209ENST00000498058 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
PRKCB-209ENST00000498058 DPM2O94777 84 aa11.56□□□□□ -0.56
PRKCB-209ENST00000498058 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
PRKCB-209ENST00000498058 IGLV5-45A0A087WSX0 123 aa11.55□□□□□ -0.56
PRKCB-209ENST00000498058 A0A087WZ39 114 aa11.55□□□□□ -0.56
PRKCB-209ENST00000498058 LINC01545Q5VT33 79 aa11.55□□□□□ -0.56
PRKCB-209ENST00000498058 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
PRKCB-209ENST00000498058 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
PRKCB-209ENST00000498058 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
PRKCB-209ENST00000498058 TMEM170BQ5T4T1 132 aa11.54□□□□□ -0.56
PRKCB-209ENST00000498058 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
PRKCB-209ENST00000498058 C11orf86A6NJI1 115 aa11.53□□□□□ -0.56
PRKCB-209ENST00000498058 IGKCP01834 107 aa11.53□□□□□ -0.56
PRKCB-209ENST00000498058 OR10D4PQ8NGN7 298 aa11.53□□□□□ -0.56
PRKCB-209ENST00000498058 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
PRKCB-209ENST00000498058 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
PRKCB-209ENST00000498058 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
PRKCB-209ENST00000498058 RNF213Q63HN8 5207 aa11.49□□□□□ -0.57
PRKCB-209ENST00000498058 KRTAP10-8P60410 259 aa11.49□□□□□ -0.57
PRKCB-209ENST00000498058 HERVK_113P61574 105 aa11.49□□□□□ -0.57
PRKCB-209ENST00000498058 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRKCB-209ENST00000498058 ORAOV1Q8WV07 137 aa11.49□□□□□ -0.57
PRKCB-209ENST00000498058 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
PRKCB-209ENST00000498058 PRSS2P07478 247 aa11.48□□□□□ -0.57
PRKCB-209ENST00000498058 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
PRKCB-209ENST00000498058 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
PRKCB-209ENST00000498058 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
PRKCB-209ENST00000498058 SCGB1D1O95968 90 aa11.47□□□□□ -0.57
PRKCB-209ENST00000498058 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
PRKCB-209ENST00000498058 SPAG11BQ08648 103 aa11.46□□□□□ -0.57
PRKCB-209ENST00000498058 SPINK6Q6UWN8 80 aa11.46□□□□□ -0.57
PRKCB-209ENST00000498058 LINC00474Q9P2X8 69 aa11.46□□□□□ -0.57
PRKCB-209ENST00000498058 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
PRKCB-209ENST00000498058 F8WDY8 70 aa11.45□□□□□ -0.58
PRKCB-209ENST00000498058 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
PRKCB-209ENST00000498058 Q8IZM0 81 aa11.45□□□□□ -0.58
PRKCB-209ENST00000498058 IGLV5-39A0A0G2JS06 123 aa11.44□□□□□ -0.58
PRKCB-209ENST00000498058 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
PRKCB-209ENST00000498058 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
PRKCB-209ENST00000498058 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
PRKCB-209ENST00000498058 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
PRKCB-209ENST00000498058 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
PRKCB-209ENST00000498058 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
PRKCB-209ENST00000498058 CXCL5P42830 114 aa11.42□□□□□ -0.58
PRKCB-209ENST00000498058 CKS1BP61024 79 aa11.42□□□□□ -0.58
PRKCB-209ENST00000498058 Q6ZRP5 223 aa11.42□□□□□ -0.58
PRKCB-209ENST00000498058 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
PRKCB-209ENST00000498058 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
PRKCB-209ENST00000498058 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-209ENST00000498058 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
PRKCB-209ENST00000498058 CAMK2N2Q96S95 79 aa11.41□□□□□ -0.58
PRKCB-209ENST00000498058 NDUFA1O15239 70 aa11.4□□□□□ -0.58
PRKCB-209ENST00000498058 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
PRKCB-209ENST00000498058 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
PRKCB-209ENST00000498058 LEPROTO15243 131 aa11.39□□□□□ -0.59
PRKCB-209ENST00000498058 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
PRKCB-209ENST00000498058 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
PRKCB-209ENST00000498058 E9PLD3 99 aa11.38□□□□□ -0.59
PRKCB-209ENST00000498058 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
PRKCB-209ENST00000498058 LGALS3P17931 250 aaKnown RBP11.36□□□□□ -0.59
PRKCB-209ENST00000498058 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
PRKCB-209ENST00000498058 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
PRKCB-209ENST00000498058 J3QQQ9 107 aa11.35□□□□□ -0.59
PRKCB-209ENST00000498058 NMUP48645 174 aa11.35□□□□□ -0.59
PRKCB-209ENST00000498058 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
PRKCB-209ENST00000498058 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms