RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 STPG4Q8N801 248 aa8.82□□□□□ -1
CPNE1-227ENST00000498056 SLPIP03973 132 aa8.81□□□□□ -1
CPNE1-227ENST00000498056 TSPEAR-AS2P59090 65 aa8.81□□□□□ -1
CPNE1-227ENST00000498056 PKHD1P08F94 4074 aa8.81□□□□□ -1
CPNE1-227ENST00000498056 C16orf90A8MZG2 172 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 LEPROTO15243 131 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
CPNE1-227ENST00000498056 C10orf25Q5T742 122 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 PLEKHB2Q96CS7 222 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
CPNE1-227ENST00000498056 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
CPNE1-227ENST00000498056 E9PLD3 99 aa8.79□□□□□ -1
CPNE1-227ENST00000498056 F8WDY8 70 aa8.79□□□□□ -1
CPNE1-227ENST00000498056 J3QQQ9 107 aa8.79□□□□□ -1
CPNE1-227ENST00000498056 C6orf48Q9UBA6 75 aa8.79□□□□□ -1
CPNE1-227ENST00000498056 NMUP48645 174 aa8.78□□□□□ -1
CPNE1-227ENST00000498056 MAJINQ3KP22 176 aa8.78□□□□□ -1
CPNE1-227ENST00000498056 ANKRD39Q53RE8 183 aa8.78□□□□□ -1
CPNE1-227ENST00000498056 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
CPNE1-227ENST00000498056 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
CPNE1-227ENST00000498056 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1.01
CPNE1-227ENST00000498056 TRBV30A0A0K0K1B3 111 aa8.77□□□□□ -1.01
CPNE1-227ENST00000498056 GCSHP23434 173 aa8.77□□□□□ -1.01
CPNE1-227ENST00000498056 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
CPNE1-227ENST00000498056 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
CPNE1-227ENST00000498056 SFTA2Q6UW10 78 aa8.77□□□□□ -1.01
CPNE1-227ENST00000498056 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
CPNE1-227ENST00000498056 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
CPNE1-227ENST00000498056 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1.01
CPNE1-227ENST00000498056 C9orf116Q5BN46 136 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-227ENST00000498056 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
CPNE1-227ENST00000498056 PYY3Q5JQD4 70 aa8.75□□□□□ -1.01
CPNE1-227ENST00000498056 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 VAMP8Q9BV40 100 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
CPNE1-227ENST00000498056 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 PFN2P35080 140 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 HERV-K104P63124 156 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 PAM16Q9Y3D7 125 aa8.73□□□□□ -1.01
CPNE1-227ENST00000498056 A0A096LNI7 61 aa8.72□□□□□ -1.01
CPNE1-227ENST00000498056 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
CPNE1-227ENST00000498056 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
CPNE1-227ENST00000498056 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
CPNE1-227ENST00000498056 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
CPNE1-227ENST00000498056 GAGE2EQ4V326 116 aa8.71□□□□□ -1.02
CPNE1-227ENST00000498056 SPATA45Q537H7 98 aa8.71□□□□□ -1.02
CPNE1-227ENST00000498056 GAGE2DQ9UEU5 116 aa8.71□□□□□ -1.02
CPNE1-227ENST00000498056 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
CPNE1-227ENST00000498056 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
CPNE1-227ENST00000498056 SDIM1Q6ZPB5 146 aa8.7□□□□□ -1.02
CPNE1-227ENST00000498056 Q6ZRP5 223 aa8.7□□□□□ -1.02
CPNE1-227ENST00000498056 PCP2Q8IVA1 136 aa8.7□□□□□ -1.02
CPNE1-227ENST00000498056 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
CPNE1-227ENST00000498056 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
CPNE1-227ENST00000498056 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
CPNE1-227ENST00000498056 LINC00158P58513 81 aa8.69□□□□□ -1.02
CPNE1-227ENST00000498056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
CPNE1-227ENST00000498056 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
CPNE1-227ENST00000498056 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
CPNE1-227ENST00000498056 HAMPP81172 84 aa8.68□□□□□ -1.02
CPNE1-227ENST00000498056 SCGB1D4Q6XE38 83 aa8.68□□□□□ -1.02
CPNE1-227ENST00000498056 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
CPNE1-227ENST00000498056 PANO1I0J062 215 aa8.67□□□□□ -1.02
CPNE1-227ENST00000498056 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
CPNE1-227ENST00000498056 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
CPNE1-227ENST00000498056 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
CPNE1-227ENST00000498056 COX17Q14061 63 aa8.66□□□□□ -1.02
CPNE1-227ENST00000498056 DAND5Q8N907 189 aa8.66□□□□□ -1.02
CPNE1-227ENST00000498056 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
CPNE1-227ENST00000498056 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 S100A12P80511 92 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 Q6ZSA8 131 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 DPH3Q96FX2 82 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
CPNE1-227ENST00000498056 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.03
CPNE1-227ENST00000498056 COX8AP10176 69 aa8.64□□□□□ -1.03
CPNE1-227ENST00000498056 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
CPNE1-227ENST00000498056 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
CPNE1-227ENST00000498056 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
CPNE1-227ENST00000498056 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
CPNE1-227ENST00000498056 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
CPNE1-227ENST00000498056 TMEM238C9JI98 176 aa8.63□□□□□ -1.03
CPNE1-227ENST00000498056 NPC2P61916 151 aa8.63□□□□□ -1.03
CPNE1-227ENST00000498056 SCXQ7RTU7 201 aa8.63□□□□□ -1.03
CPNE1-227ENST00000498056 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
CPNE1-227ENST00000498056 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CPNE1-227ENST00000498056 A0A087WYN8 130 aa8.61□□□□□ -1.03
CPNE1-227ENST00000498056 TIMM17BO60830 172 aa8.61□□□□□ -1.03
CPNE1-227ENST00000498056 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
CPNE1-227ENST00000498056 BIRC6Q9NR09 4857 aa8.61□□□□□ -1.03
CPNE1-227ENST00000498056 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
CPNE1-227ENST00000498056 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms