RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 LINC01547P58512 204 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-208ENST00000497026 DEFB131AP59861 70 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 NPC2P61916 151 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 DEFB135Q30KP9 77 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 CASC10Q5T4H9 136 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 SPANXN1Q5VSR9 72 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 HRCT1Q6UXD1 115 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 C2orf66Q6UXQ4 117 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 DAND5Q8N907 189 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 C17orf77Q96MU5 243 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 JPT2Q9H910 190 aa3.5□□□□□ -1.85
CSMD3-208ENST00000497026 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-208ENST00000497026 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 IGKV2-40A0A087WW87 121 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-208ENST00000497026 TINCRA0A1B0GVN0 87 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 hADV29S1A0JD25 119 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 C3orf84H3BNL1 204 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 H7C423 109 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 SOCS3O14543 225 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 RS1O15537 224 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 IGKV2D-40P01614 121 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-208ENST00000497026 GIG44P09565 113 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-208ENST00000497026 APOC4P55056 127 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
CSMD3-208ENST00000497026 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 SDIM1Q6ZPB5 146 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 C5orf38Q86SI9 138 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 SERP2Q8N6R1 65 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 TIMM17AQ99595 171 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 DPH3P1Q9H4G8 78 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 TP53TG1Q9Y2A0 90 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 V9GYY9 64 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 RYR3Q15413 4870 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 DNAH7Q8WXX0 4024 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
CSMD3-208ENST00000497026 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
CSMD3-208ENST00000497026 FAM236DA0A1B0GTK5 79 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 KNCNA6PVL3 124 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 FAM236CP0DP71 79 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-208ENST00000497026 PFN2P35080 140 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 CMC4P56277 68 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-208ENST00000497026 DEFB1P60022 68 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 Q6JHZ5 121 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
CSMD3-208ENST00000497026 IGLV4-69A0A075B6H9 119 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 A0A0J9YWU9 116 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 TMEM223A0PJW6 202 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 DNAL4O96015 105 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 SEC61GP60059 68 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 S100A7L2Q5SY68 101 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 FAM222AQ5U5X8 452 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 Q5XG85 94 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 CEMP1Q6PRD7 247 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-208ENST00000497026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 MUSTN1Q8IVN3 82 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 STHQ8IWL8 128 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 Q8TAT8 98 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 MRPL53Q96EL3 112 aaKnown RBP3.47□□□□□ -1.85
CSMD3-208ENST00000497026 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 C9orf85Q96MD7 179 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 HYDINQ4G0P3 5121 aa3.47□□□□□ -1.85
CSMD3-208ENST00000497026 TRAV12-2A0A075B6T6 113 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 F6UB75 175 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 MGPP08493 103 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 ZNF80P51504 273 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-208ENST00000497026 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
CSMD3-208ENST00000497026 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 SNRPD3P62318 126 aaKnown RBP3.46□□□□□ -1.86
CSMD3-208ENST00000497026 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
CSMD3-208ENST00000497026 C4orf26Q17RF5 130 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 RNF182Q8N6D2 247 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 CSNK1G2-AS1Q8NCQ2 148 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 LINC00477Q96M19 166 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 DSCR8Q96T75 97 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 RYR2Q92736 4967 aa3.46□□□□□ -1.86
CSMD3-208ENST00000497026 TRAV8-3A0A0A6YYJ7 113 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 TRAV26-2A0A0B4J265 109 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 A8MTW9 85 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 TIMM17BO60830 172 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 ZNF22P17026 224 aaPredicted RBP3.45□□□□□ -1.86
CSMD3-208ENST00000497026 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 RHOHQ15669 191 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 MIAQ16674 131 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 ZNF876PQ49A33 203 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 C1orf195Q5TG92 126 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 Q8NAQ8 132 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 VSIG2Q96IQ7 327 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 AMELXQ99217 191 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 TIMM21Q9BVV7 248 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 C11orf68Q9H3H3 251 aaKnown RBP3.45□□□□□ -1.86
CSMD3-208ENST00000497026 DNAH1Q9P2D7 4330 aa3.45□□□□□ -1.86
CSMD3-208ENST00000497026 NACAE9PAV3 2078 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms