RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 AMELXQ99217 191 aa4.88□□□□□ -1.63
CDHR3-214ENST00000496633 GEMIN7Q9H840 131 aaKnown RBP4.88□□□□□ -1.63
CDHR3-214ENST00000496633 MRPL35Q9NZE8 188 aaKnown RBP4.88□□□□□ -1.63
CDHR3-214ENST00000496633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-214ENST00000496633 SLPIP03973 132 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 PRSS2P07478 247 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 LINC00614P0C842 121 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 UBE2D1P51668 147 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 COX6A2Q02221 97 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 MAJINQ3KP22 176 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
CDHR3-214ENST00000496633 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 SPACA4Q8TDM5 124 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 ORAOV1Q8WV07 137 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 PLAC8Q9NZF1 115 aa4.87□□□□□ -1.63
CDHR3-214ENST00000496633 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
CDHR3-214ENST00000496633 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
CDHR3-214ENST00000496633 CXCL5P42830 114 aa4.86□□□□□ -1.63
CDHR3-214ENST00000496633 RPL37AP61513 92 aaKnown RBP4.86□□□□□ -1.63
CDHR3-214ENST00000496633 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
CDHR3-214ENST00000496633 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
CDHR3-214ENST00000496633 A0A087WYN8 130 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 C9orf118A6NHY6 69 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 H3BRM9 83 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 ATP5LO75964 103 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 TLX1NBP0CAT3 122 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 CKS1BP61024 79 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 PMVKQ15126 192 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 SFTA2Q6UW10 78 aa4.85□□□□□ -1.63
CDHR3-214ENST00000496633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.85□□□□□ -1.63
CDHR3-214ENST00000496633 IGKV2-24A0A0C4DH68 120 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 TINCRA0A1B0GVN0 87 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 HBDP02042 147 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 VPREB1P12018 145 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 FABP4P15090 132 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 C6orf226Q5I0X4 101 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 Q6ZRU5 148 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 Q8IZM0 81 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 STPG4Q8N801 248 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 CHCHD1Q96BP2 118 aaKnown RBP4.84□□□□□ -1.63
CDHR3-214ENST00000496633 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
CDHR3-214ENST00000496633 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
CDHR3-214ENST00000496633 HAMPP81172 84 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 PDZD11Q5EBL8 140 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 C18orf32Q8TCD1 76 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 DNAH8Q96JB1 4490 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 FAT1Q14517 4588 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 PCLOQ9Y6V0 5065 aa4.83□□□□□ -1.64
CDHR3-214ENST00000496633 A0A096LNI7 61 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 OXTP01178 125 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 RPL18AQ02543 176 aaKnown RBP4.82□□□□□ -1.64
CDHR3-214ENST00000496633 GAGE2BQ13066 116 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 CST9LQ9H4G1 147 aa4.82□□□□□ -1.64
CDHR3-214ENST00000496633 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 F8VRH5 84 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 HSBP1O75506 76 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 KIAA0087Q14695 138 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 Q6ZRP5 223 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 LINC00526Q96FQ7 95 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 TOMM7Q9P0U1 55 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 CDKN2A-AS1Q9UH64 79 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
CDHR3-214ENST00000496633 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-214ENST00000496633 BAGE3Q86Y29 109 aa4.8□□□□□ -1.64
CDHR3-214ENST00000496633 DMBT1Q9UGM3 2413 aaPredicted RBP4.8□□□□□ -1.64
CDHR3-214ENST00000496633 A0A0J9YXV3 536 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
CDHR3-214ENST00000496633 PANO1I0J062 215 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 M0R143 59 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 PRYO14603 147 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 LINC00310P59036 64 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 UNQ6190/PRO20217Q6UXQ8 127 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 C6orf48Q9UBA6 75 aa4.79□□□□□ -1.64
CDHR3-214ENST00000496633 CHTOPQ9Y3Y2 248 aaKnown RBP4.79□□□□□ -1.64
CDHR3-214ENST00000496633 TRAV12-1A0A0B4J245 112 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 A0A1B0GV90 55 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 C20orf202A1L168 122 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 C9orf116Q5BN46 136 aaPredicted RBP4.78□□□□□ -1.64
CDHR3-214ENST00000496633 COX7B2Q8TF08 81 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
CDHR3-214ENST00000496633 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 COX17Q14061 63 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 SPINK6Q6UWN8 80 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
CDHR3-214ENST00000496633 A0A096LNJ9 63 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-214ENST00000496633 PRR3P79522 188 aaKnown RBP4.76□□□□□ -1.65
CDHR3-214ENST00000496633 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms