RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
SMARCD3-215ENST00000496530 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
SMARCD3-215ENST00000496530 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
SMARCD3-215ENST00000496530 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 LEPROTO15243 131 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 NMUP48645 174 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 S100A12P80511 92 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 PLEKHB2Q96CS7 222 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
SMARCD3-215ENST00000496530 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 PYY3Q5JQD4 70 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 C2orf82Q6UX34 121 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 PAM16Q9Y3D7 125 aa5.35□□□□□ -1.55
SMARCD3-215ENST00000496530 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 A0A0U1RRA0 63 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 J3QQQ9 107 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 SYCNQ0VAF6 134 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 WFDC2Q14508 124 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 SPATA45Q537H7 98 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 C15orf56Q8N910 161 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 C14orf144Q96I85 54 aa5.34□□□□□ -1.55
SMARCD3-215ENST00000496530 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 E9PLD3 99 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 NDUFA1O15239 70 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 PFN2P35080 140 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 LINC00158P58513 81 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 Q8IZM0 81 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 DNAH10Q8IVF4 4471 aa5.33□□□□□ -1.56
SMARCD3-215ENST00000496530 HECTD4Q9Y4D8 3996 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 KIAA0087Q14695 138 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 NDUFA12Q9UI09 145 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 PKIGQ9Y2B9 76 aa5.32□□□□□ -1.56
SMARCD3-215ENST00000496530 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 C9orf116Q5BN46 136 aaPredicted RBP5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 Q6ZRU5 148 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 PCP2Q8IVA1 136 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 Q8N1X5 172 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 CARD19Q96LW7 228 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 PRO1933Q9H354 126 aa5.31□□□□□ -1.56
SMARCD3-215ENST00000496530 GVQW2A0A096LPI5 108 aaPredicted RBP5.3□□□□□ -1.56
SMARCD3-215ENST00000496530 FAM229AH3BQW9 127 aa5.3□□□□□ -1.56
SMARCD3-215ENST00000496530 SLPIP03973 132 aa5.3□□□□□ -1.56
SMARCD3-215ENST00000496530 GAGE2BQ13066 116 aa5.3□□□□□ -1.56
SMARCD3-215ENST00000496530 LINC01620Q4KN68 170 aa5.3□□□□□ -1.56
SMARCD3-215ENST00000496530 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 F8WDY8 70 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 SMIM13P0DJ93 91 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 CXCL5P42830 114 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 TSPEAR-AS2P59090 65 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 HERV-K104P63124 156 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 C9orf163Q8N9P6 203 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 C12orf57Q99622 126 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
SMARCD3-215ENST00000496530 LINC00587B1AMM8 73 aa5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 XGP55808 180 aa5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 RPL18AQ02543 176 aaKnown RBP5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 SRSF9Q13242 221 aaKnown RBP eCLIP5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
SMARCD3-215ENST00000496530 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 LOC107984640A0A0U1RRK4 108 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 GHRHP01286 108 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 SMIM6P0DI80 62 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 COX8AP10176 69 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 NPC2P61916 151 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 SFTA2Q6UW10 78 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 ERG28Q9UKR5 140 aa5.27□□□□□ -1.57
SMARCD3-215ENST00000496530 PKD1P98161 4303 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 RNF151Q2KHN1 245 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 Q6ZSA8 131 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 LINC00518Q8N0U6 118 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 DAND5Q8N907 189 aa5.26□□□□□ -1.57
SMARCD3-215ENST00000496530 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms