RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 A4D1N5 150 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 GAGE2EQ4V326 116 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 GAGE2DQ9UEU5 116 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 GVQW2A0A096LPI5 108 aaPredicted RBP5.77□□□□□ -1.49
U2AF1-212ENST00000496462 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 Q8N814 137 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 STARD9Q9P2P6 4700 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 FOXI1Q12951 378 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 Q8N3U1 123 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 RYR3Q15413 4870 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 SLC25A34Q6PIV7 304 aa5.76□□□□□ -1.49
U2AF1-212ENST00000496462 PTTG1IPP53801 180 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 COX17Q14061 63 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 OR13C6PQ8NH95 151 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 ZNF625Q96I27 306 aaPredicted RBP5.75□□□□□ -1.49
U2AF1-212ENST00000496462 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 PRO1933Q9H354 126 aa5.75□□□□□ -1.49
U2AF1-212ENST00000496462 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 E9PLD3 99 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 ERG28Q9UKR5 140 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 TMEM223A0PJW6 202 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 TNP2Q05952 138 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 SPATA45Q537H7 98 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 HIST1H4GQ99525 98 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 Q6ZVH6 145 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 FAM19A3Q7Z5A8 133 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 PAM16Q9Y3D7 125 aa5.74□□□□□ -1.49
U2AF1-212ENST00000496462 VAMP3Q15836 100 aa5.73□□□□□ -1.49
U2AF1-212ENST00000496462 LINC00173Q6ZV60 143 aa5.73□□□□□ -1.49
U2AF1-212ENST00000496462 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
U2AF1-212ENST00000496462 SMIM1B2RUZ4 78 aa5.73□□□□□ -1.49
U2AF1-212ENST00000496462 NUPR1O60356 82 aa5.73□□□□□ -1.49
U2AF1-212ENST00000496462 HNRNPA3P51991 378 aaKnown RBP5.73□□□□□ -1.49
U2AF1-212ENST00000496462 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 IFITM1P13164 125 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 Q1RN00 199 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 RAB37Q96AX2 223 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 DNAH7Q8WXX0 4024 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 NDUFC2-KCTD14E9PQ53 114 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 DDTP30046 118 aa5.72□□□□□ -1.49
U2AF1-212ENST00000496462 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
U2AF1-212ENST00000496462 M0R143 59 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 GHRHP01286 108 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 COX6A2Q02221 97 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 BOD1L2Q8IYS8 172 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 STPG4Q8N801 248 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 C9orf163Q8N9P6 203 aa5.71□□□□□ -1.49
U2AF1-212ENST00000496462 UNQ6190/PRO20217Q6UXQ8 127 aa5.71□□□□□ -1.5
U2AF1-212ENST00000496462 A0A096LNJ9 63 aa5.71□□□□□ -1.5
U2AF1-212ENST00000496462 LINC00526Q96FQ7 95 aa5.71□□□□□ -1.5
U2AF1-212ENST00000496462 UQCR10Q9UDW1 63 aa5.71□□□□□ -1.5
U2AF1-212ENST00000496462 Q6ZRU5 148 aa5.7□□□□□ -1.5
U2AF1-212ENST00000496462 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
U2AF1-212ENST00000496462 C2orf82Q6UX34 121 aa5.69□□□□□ -1.5
U2AF1-212ENST00000496462 RYR2Q92736 4967 aa5.69□□□□□ -1.5
U2AF1-212ENST00000496462 SLC25A20O43772 301 aa5.69□□□□□ -1.5
U2AF1-212ENST00000496462 PLECQ15149 4684 aaKnown RBP5.69□□□□□ -1.5
U2AF1-212ENST00000496462 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
U2AF1-212ENST00000496462 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
U2AF1-212ENST00000496462 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 IGLV5-39A0A0G2JS06 123 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 A0A0J9YXY3 114 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 A6NDN8 102 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 TIMM17BO60830 172 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 COX6CP09669 75 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 LYRM7Q5U5X0 104 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
U2AF1-212ENST00000496462 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
U2AF1-212ENST00000496462 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
U2AF1-212ENST00000496462 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
U2AF1-212ENST00000496462 UBE2AP49459 152 aa5.66□□□□□ -1.5
U2AF1-212ENST00000496462 SND1-IT1Q9HBX3 110 aa5.66□□□□□ -1.5
U2AF1-212ENST00000496462 DYNC2H1Q8NCM8 4307 aaKnown RBP5.66□□□□□ -1.5
U2AF1-212ENST00000496462 LINC00310P59036 64 aa5.65□□□□□ -1.5
U2AF1-212ENST00000496462 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
U2AF1-212ENST00000496462 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
U2AF1-212ENST00000496462 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.5
U2AF1-212ENST00000496462 M0R378 163 aa5.65□□□□□ -1.5
U2AF1-212ENST00000496462 M0QXV9 152 aa5.65□□□□□ -1.51
U2AF1-212ENST00000496462 COX8AP10176 69 aa5.65□□□□□ -1.51
U2AF1-212ENST00000496462 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.51
U2AF1-212ENST00000496462 PSMB2P49721 201 aa5.65□□□□□ -1.51
U2AF1-212ENST00000496462 TAL2Q16559 108 aa5.65□□□□□ -1.51
U2AF1-212ENST00000496462 SPANXB1Q9NS25 103 aaPredicted RBP5.64□□□□□ -1.51
U2AF1-212ENST00000496462 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
U2AF1-212ENST00000496462 NPC2P61916 151 aa5.64□□□□□ -1.51
U2AF1-212ENST00000496462 C9orf116Q5BN46 136 aaPredicted RBP5.64□□□□□ -1.51
U2AF1-212ENST00000496462 Q6ZRN7 208 aaPredicted RBP5.64□□□□□ -1.51
U2AF1-212ENST00000496462 SCGB1C2P0DMR2 95 aa5.64□□□□□ -1.51
U2AF1-212ENST00000496462 HSD52Q0P140 79 aa5.64□□□□□ -1.51
U2AF1-212ENST00000496462 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
U2AF1-212ENST00000496462 SPANXCQ9NY87 97 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms