RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.46
SMARCAL1-213ENST00000496037 COX8AP10176 69 aa5.95□□□□□ -1.46
SMARCAL1-213ENST00000496037 MGST1P10620 155 aaKnown RBP5.95□□□□□ -1.46
SMARCAL1-213ENST00000496037 CACNG7P62955 275 aa5.95□□□□□ -1.46
SMARCAL1-213ENST00000496037 TMEM97Q5BJF2 176 aa5.95□□□□□ -1.46
SMARCAL1-213ENST00000496037 HSPB8Q9UJY1 196 aa5.95□□□□□ -1.46
SMARCAL1-213ENST00000496037 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 FNDC10F2Z333 226 aa5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 HSD52Q0P140 79 aa5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 ZNF492Q9P255 531 aa5.94□□□□□ -1.46
SMARCAL1-213ENST00000496037 LEPROTL1O95214 131 aa5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 TAS2R45P59539 299 aa5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 C10orf113Q5VZT2 155 aa5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 OR10AG1Q8NH19 301 aa5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 CHCHD10Q8WYQ3 142 aaPredicted RBP5.93□□□□□ -1.46
SMARCAL1-213ENST00000496037 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 A0A1W2PRE2 83 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 FABP2P12104 132 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 ZNF138P52744 262 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 LINC01545Q5VT33 79 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 LINC00479Q96M42 142 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 MGST2Q99735 147 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 NPVFQ9HCQ7 196 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
SMARCAL1-213ENST00000496037 TRBV19A0A075B6N1 114 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 A0A1B0GXF2 115 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 LINC00694P0DN24 101 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 ZNF876PQ49A33 203 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 MIC13Q5XKP0 118 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 Q6ZRP5 223 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 RNASE7Q9H1E1 156 aaKnown RBP5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
SMARCAL1-213ENST00000496037 TMEM262E9PQX1 116 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 H3BUT2 72 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 CKS1BP61024 79 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 HBBP68871 147 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 Q6AWC8 147 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 ENHOQ6UWT2 76 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 C2orf91Q6ZV80 131 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 EXOC3-AS1Q8N2X6 119 aa5.9□□□□□ -1.46
SMARCAL1-213ENST00000496037 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 GNRH2O43555 120 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 PDE6HQ13956 83 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 MIAQ16674 131 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 TMEM75Q8N9X5 138 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 NUP35Q8NFH5 326 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
SMARCAL1-213ENST00000496037 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 ANGP03950 147 aaKnown RBP5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 SMAGPQ0VAQ4 97 aa5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 NDFIP1Q9BT67 221 aa5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 GFRA4Q9GZZ7 299 aa5.88□□□□□ -1.47
SMARCAL1-213ENST00000496037 A8MWL6 223 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 SMIM1B2RUZ4 78 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 F8W1H4 67 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 SMIM13P0DJ93 91 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 FGF6P10767 208 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 CSN1S1P47710 185 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 COX6A2Q02221 97 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
SMARCAL1-213ENST00000496037 NDUFV3P56181 108 aaKnown RBP5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 TWIST1Q15672 202 aa5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 MIR17HGQ75NE6 70 aa5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
SMARCAL1-213ENST00000496037 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
SMARCAL1-213ENST00000496037 HIGD1CA8MV81 97 aa5.85□□□□□ -1.47
SMARCAL1-213ENST00000496037 PEX7O00628 323 aa5.85□□□□□ -1.47
SMARCAL1-213ENST00000496037 TMEM14CQ9P0S9 112 aa5.85□□□□□ -1.47
SMARCAL1-213ENST00000496037 PYYP10082 97 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 CLPSL2Q6UWE3 100 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 LINC00173Q6ZV60 143 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 KIR2DL4Q99706 377 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 SPANXA1Q9NS26 97 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 TP73-AS1Q9UF72 201 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 LENEPQ9Y5L5 61 aa5.84□□□□□ -1.47
SMARCAL1-213ENST00000496037 RBAKDNA6NC62 111 aa5.83□□□□□ -1.48
SMARCAL1-213ENST00000496037 PSMB2P49721 201 aa5.83□□□□□ -1.48
SMARCAL1-213ENST00000496037 UBE2L3P68036 154 aaKnown RBP5.83□□□□□ -1.48
SMARCAL1-213ENST00000496037 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
SMARCAL1-213ENST00000496037 IGLV10-54A0A075B6I4 117 aa5.82□□□□□ -1.48
SMARCAL1-213ENST00000496037 A8MWV9 139 aa5.82□□□□□ -1.48
SMARCAL1-213ENST00000496037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
SMARCAL1-213ENST00000496037 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
SMARCAL1-213ENST00000496037 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
SMARCAL1-213ENST00000496037 IGLV1-50A0A075B6I6 118 aa5.81□□□□□ -1.48
SMARCAL1-213ENST00000496037 H0Y9J4 135 aa5.81□□□□□ -1.48
SMARCAL1-213ENST00000496037 FOXA3P55318 350 aaPredicted RBP5.81□□□□□ -1.48
SMARCAL1-213ENST00000496037 KRTAP26-1Q6PEX3 210 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms