RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
HDAC4-211ENST00000494800 A0A1W2PNN7 141 aa11.02□□□□□ -0.65
HDAC4-211ENST00000494800 GAGE2EQ4V326 116 aa11.02□□□□□ -0.65
HDAC4-211ENST00000494800 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.65
HDAC4-211ENST00000494800 HERC1Q15751 4861 aa11.01□□□□□ -0.65
HDAC4-211ENST00000494800 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
HDAC4-211ENST00000494800 HBDP02042 147 aa11.01□□□□□ -0.65
HDAC4-211ENST00000494800 CXCL5P42830 114 aa11□□□□□ -0.65
HDAC4-211ENST00000494800 H3BRM9 83 aa10.99□□□□□ -0.65
HDAC4-211ENST00000494800 NDUFA6P56556 154 aa10.99□□□□□ -0.65
HDAC4-211ENST00000494800 PDZD11Q5EBL8 140 aa10.99□□□□□ -0.65
HDAC4-211ENST00000494800 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
HDAC4-211ENST00000494800 F8VRH5 84 aa10.98□□□□□ -0.65
HDAC4-211ENST00000494800 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
HDAC4-211ENST00000494800 ATP5LO75964 103 aa10.97□□□□□ -0.65
HDAC4-211ENST00000494800 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.65
HDAC4-211ENST00000494800 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.65
HDAC4-211ENST00000494800 FAM19A5Q7Z5A7 132 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-211ENST00000494800 COX7B2Q8TF08 81 aa10.96□□□□□ -0.65
HDAC4-211ENST00000494800 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
HDAC4-211ENST00000494800 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
HDAC4-211ENST00000494800 A0A096LNJ9 63 aa10.95□□□□□ -0.66
HDAC4-211ENST00000494800 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
HDAC4-211ENST00000494800 PHF5AQ7RTV0 110 aaKnown RBP10.95□□□□□ -0.66
HDAC4-211ENST00000494800 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
HDAC4-211ENST00000494800 CBLN2Q8IUK8 224 aa10.94□□□□□ -0.66
HDAC4-211ENST00000494800 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
HDAC4-211ENST00000494800 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
HDAC4-211ENST00000494800 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
HDAC4-211ENST00000494800 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
HDAC4-211ENST00000494800 M0QXV9 152 aa10.92□□□□□ -0.66
HDAC4-211ENST00000494800 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
HDAC4-211ENST00000494800 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
HDAC4-211ENST00000494800 UBE2BP63146 152 aa10.91□□□□□ -0.66
HDAC4-211ENST00000494800 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
HDAC4-211ENST00000494800 SERTAD4-AS1Q5TG53 156 aa10.91□□□□□ -0.66
HDAC4-211ENST00000494800 BAGE3Q86Y29 109 aa10.91□□□□□ -0.66
HDAC4-211ENST00000494800 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
HDAC4-211ENST00000494800 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.66
HDAC4-211ENST00000494800 FAT3Q8TDW7 4589 aa10.9□□□□□ -0.67
HDAC4-211ENST00000494800 HSBP1O75506 76 aa10.88□□□□□ -0.67
HDAC4-211ENST00000494800 SRSF9Q13242 221 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC4-211ENST00000494800 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
HDAC4-211ENST00000494800 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-211ENST00000494800 TMEM170BQ5T4T1 132 aa10.87□□□□□ -0.67
HDAC4-211ENST00000494800 TRGC2P03986 189 aa10.86□□□□□ -0.67
HDAC4-211ENST00000494800 LBHQ53QV2 105 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-211ENST00000494800 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
HDAC4-211ENST00000494800 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
HDAC4-211ENST00000494800 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
HDAC4-211ENST00000494800 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
HDAC4-211ENST00000494800 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
HDAC4-211ENST00000494800 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
HDAC4-211ENST00000494800 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
HDAC4-211ENST00000494800 IGLV7-43P04211 117 aa10.84□□□□□ -0.67
HDAC4-211ENST00000494800 KRTAP7-1Q8IUC3 87 aa10.84□□□□□ -0.67
HDAC4-211ENST00000494800 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
HDAC4-211ENST00000494800 ODF1Q14990 250 aa10.83□□□□□ -0.68
HDAC4-211ENST00000494800 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
HDAC4-211ENST00000494800 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
HDAC4-211ENST00000494800 TP73-AS1Q9UF72 201 aa10.81□□□□□ -0.68
HDAC4-211ENST00000494800 PFN2P35080 140 aa10.8□□□□□ -0.68
HDAC4-211ENST00000494800 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
HDAC4-211ENST00000494800 FAM19A2Q8N3H0 131 aa10.8□□□□□ -0.68
HDAC4-211ENST00000494800 COX17Q14061 63 aa10.79□□□□□ -0.68
HDAC4-211ENST00000494800 KRTAP11-1Q8IUC1 163 aa10.79□□□□□ -0.68
HDAC4-211ENST00000494800 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
HDAC4-211ENST00000494800 COLCA2A8K830 154 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 NUPR1O60356 82 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 SERF1AO75920 110 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 LEPROTL1O95214 131 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 ERG28Q9UKR5 140 aa10.78□□□□□ -0.68
HDAC4-211ENST00000494800 H0Y8G0 127 aa10.76□□□□□ -0.69
HDAC4-211ENST00000494800 HSPB8Q9UJY1 196 aa10.76□□□□□ -0.69
HDAC4-211ENST00000494800 TMEM223A0PJW6 202 aa10.75□□□□□ -0.69
HDAC4-211ENST00000494800 H0Y9J4 135 aa10.75□□□□□ -0.69
HDAC4-211ENST00000494800 ZNF625Q96I27 306 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-211ENST00000494800 IGLV5-37A0A075B6J1 123 aa10.73□□□□□ -0.69
HDAC4-211ENST00000494800 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
HDAC4-211ENST00000494800 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
HDAC4-211ENST00000494800 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
HDAC4-211ENST00000494800 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
HDAC4-211ENST00000494800 GAGE10A6NGK3 116 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 ZNF861PO60384 105 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 PLNP26678 52 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 LINC00158P58513 81 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 LINC00310P59036 64 aa10.71□□□□□ -0.69
HDAC4-211ENST00000494800 BCE1O60756 84 aa10.7□□□□□ -0.7
HDAC4-211ENST00000494800 ATP6V1G1O75348 118 aa10.7□□□□□ -0.7
HDAC4-211ENST00000494800 FABP4P15090 132 aa10.7□□□□□ -0.7
HDAC4-211ENST00000494800 LINC00587B1AMM8 73 aa10.69□□□□□ -0.7
HDAC4-211ENST00000494800 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
HDAC4-211ENST00000494800 HERV-K104P63124 156 aa10.69□□□□□ -0.7
HDAC4-211ENST00000494800 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
HDAC4-211ENST00000494800 MAP1LC3CQ9BXW4 147 aa10.68□□□□□ -0.7
HDAC4-211ENST00000494800 HERVK_113P61574 105 aa10.67□□□□□ -0.7
HDAC4-211ENST00000494800 MYMXA0A1B0GTQ4 84 aa10.66□□□□□ -0.7
HDAC4-211ENST00000494800 SCO1O75880 301 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms