RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 KRTAP29-1A8MX34 341 aaPredicted RBP13.74□□□□□ -0.21
HPS3-207ENST00000494327 S100A6P06703 90 aa13.74□□□□□ -0.21
HPS3-207ENST00000494327 SEC11AP67812 179 aa13.74□□□□□ -0.21
HPS3-207ENST00000494327 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
HPS3-207ENST00000494327 LINC01561Q8N1V8 128 aa13.74□□□□□ -0.21
HPS3-207ENST00000494327 GEMIN7Q9H840 131 aaKnown RBP13.74□□□□□ -0.21
HPS3-207ENST00000494327 NUPR1O60356 82 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 LINC00310P59036 64 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 HERVK_113P63121 156 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 C2orf82Q6UX34 121 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 FAM19A3Q7Z5A8 133 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 TOMM7Q9P0U1 55 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 C6orf48Q9UBA6 75 aa13.73□□□□□ -0.21
HPS3-207ENST00000494327 A0A1W2PNN7 141 aa13.72□□□□□ -0.21
HPS3-207ENST00000494327 LINC01549A6NIU2 74 aa13.72□□□□□ -0.21
HPS3-207ENST00000494327 PRSS2P07478 247 aa13.72□□□□□ -0.21
HPS3-207ENST00000494327 CDKN2A-AS1Q9UH64 79 aa13.71□□□□□ -0.21
HPS3-207ENST00000494327 HBDP02042 147 aa13.7□□□□□ -0.22
HPS3-207ENST00000494327 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
HPS3-207ENST00000494327 C9orf116Q5BN46 136 aaPredicted RBP13.7□□□□□ -0.22
HPS3-207ENST00000494327 PACRGQ96M98 296 aaPredicted RBP13.7□□□□□ -0.22
HPS3-207ENST00000494327 FAM19A2Q8N3H0 131 aa13.69□□□□□ -0.22
HPS3-207ENST00000494327 TMA7Q9Y2S6 64 aaKnown RBP13.69□□□□□ -0.22
HPS3-207ENST00000494327 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 C6orf226Q5I0X4 101 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 Q6ZRP5 223 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 CST9LQ9H4G1 147 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
HPS3-207ENST00000494327 A0A096LNJ9 63 aa13.67□□□□□ -0.22
HPS3-207ENST00000494327 OXTP01178 125 aa13.67□□□□□ -0.22
HPS3-207ENST00000494327 CKS1BP61024 79 aa13.67□□□□□ -0.22
HPS3-207ENST00000494327 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
HPS3-207ENST00000494327 TRBV30A0A0K0K1B3 111 aa13.66□□□□□ -0.22
HPS3-207ENST00000494327 TLX1NBP0CAT3 122 aa13.66□□□□□ -0.22
HPS3-207ENST00000494327 PMVKQ15126 192 aa13.66□□□□□ -0.22
HPS3-207ENST00000494327 DMBT1Q9UGM3 2413 aaPredicted RBP13.66□□□□□ -0.22
HPS3-207ENST00000494327 HERC1Q15751 4861 aa13.65□□□□□ -0.22
HPS3-207ENST00000494327 TINCRA0A1B0GVN0 87 aa13.65□□□□□ -0.22
HPS3-207ENST00000494327 SNRPEP62304 92 aaKnown RBP13.65□□□□□ -0.22
HPS3-207ENST00000494327 PDZD11Q5EBL8 140 aa13.65□□□□□ -0.22
HPS3-207ENST00000494327 Q8IZM0 81 aa13.65□□□□□ -0.22
HPS3-207ENST00000494327 C5orf52A6NGY3 159 aa13.63□□□□□ -0.23
HPS3-207ENST00000494327 PHF5AQ7RTV0 110 aaKnown RBP13.63□□□□□ -0.23
HPS3-207ENST00000494327 FAM168BA1KXE4 195 aa13.62□□□□□ -0.23
HPS3-207ENST00000494327 ATP5LO75964 103 aa13.62□□□□□ -0.23
HPS3-207ENST00000494327 LEPROTL1O95214 131 aa13.62□□□□□ -0.23
HPS3-207ENST00000494327 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
HPS3-207ENST00000494327 FABP4P15090 132 aa13.61□□□□□ -0.23
HPS3-207ENST00000494327 S100A2P29034 98 aa13.61□□□□□ -0.23
HPS3-207ENST00000494327 HIST3H2BBQ8N257 126 aa13.61□□□□□ -0.23
HPS3-207ENST00000494327 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
HPS3-207ENST00000494327 FAM19A5Q7Z5A7 132 aaPredicted RBP13.6□□□□□ -0.23
HPS3-207ENST00000494327 HSPB8Q9UJY1 196 aa13.6□□□□□ -0.23
HPS3-207ENST00000494327 IGLV5-45A0A087WSX0 123 aa13.59□□□□□ -0.23
HPS3-207ENST00000494327 SPINK8P0C7L1 97 aa13.59□□□□□ -0.23
HPS3-207ENST00000494327 LRP1Q07954 4544 aaKnown RBP13.59□□□□□ -0.23
HPS3-207ENST00000494327 COX7B2Q8TF08 81 aa13.58□□□□□ -0.24
HPS3-207ENST00000494327 IFI27L1Q96BM0 104 aa13.58□□□□□ -0.24
HPS3-207ENST00000494327 PKHD1L1Q86WI1 4243 aa13.57□□□□□ -0.24
HPS3-207ENST00000494327 F8VRH5 84 aa13.57□□□□□ -0.24
HPS3-207ENST00000494327 H3BRM9 83 aa13.55□□□□□ -0.24
HPS3-207ENST00000494327 CXCL5P42830 114 aa13.55□□□□□ -0.24
HPS3-207ENST00000494327 C9orf129Q5T035 196 aaKnown RBP13.55□□□□□ -0.24
HPS3-207ENST00000494327 PSORS1C2Q9UIG4 136 aa13.55□□□□□ -0.24
HPS3-207ENST00000494327 FAT3Q8TDW7 4589 aa13.54□□□□□ -0.24
HPS3-207ENST00000494327 IGLC3P0DOY3 106 aa13.54□□□□□ -0.24
HPS3-207ENST00000494327 HIST1H2BLQ99880 126 aa13.54□□□□□ -0.24
HPS3-207ENST00000494327 MAP1LC3CQ9BXW4 147 aa13.53□□□□□ -0.24
HPS3-207ENST00000494327 C1orf137Q5JT78 98 aa13.52□□□□□ -0.25
HPS3-207ENST00000494327 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
HPS3-207ENST00000494327 KRTAP7-1Q8IUC3 87 aa13.52□□□□□ -0.25
HPS3-207ENST00000494327 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.25
HPS3-207ENST00000494327 M0QXV9 152 aa13.51□□□□□ -0.25
HPS3-207ENST00000494327 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
HPS3-207ENST00000494327 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
HPS3-207ENST00000494327 UBE2BP63146 152 aa13.49□□□□□ -0.25
HPS3-207ENST00000494327 KRTAP11-1Q8IUC1 163 aa13.49□□□□□ -0.25
HPS3-207ENST00000494327 TRAV12-1A0A0B4J245 112 aa13.48□□□□□ -0.25
HPS3-207ENST00000494327 H0Y8G0 127 aa13.48□□□□□ -0.25
HPS3-207ENST00000494327 C11orf86A6NJI1 115 aa13.47□□□□□ -0.25
HPS3-207ENST00000494327 C3orf79P0CE67 100 aa13.47□□□□□ -0.25
HPS3-207ENST00000494327 MT1HL1P0DM35 61 aa13.47□□□□□ -0.25
HPS3-207ENST00000494327 KRTDAPP60985 99 aa13.47□□□□□ -0.25
HPS3-207ENST00000494327 TMEM170BQ5T4T1 132 aa13.47□□□□□ -0.25
HPS3-207ENST00000494327 CHTOPQ9Y3Y2 248 aaKnown RBP13.47□□□□□ -0.25
HPS3-207ENST00000494327 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.25
HPS3-207ENST00000494327 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
HPS3-207ENST00000494327 REG3GQ6UW15 175 aa13.45□□□□□ -0.26
HPS3-207ENST00000494327 PET117Q6UWS5 81 aa13.45□□□□□ -0.26
HPS3-207ENST00000494327 IGLV5-39A0A0G2JS06 123 aa13.44□□□□□ -0.26
HPS3-207ENST00000494327 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
HPS3-207ENST00000494327 ODF1Q14990 250 aa13.42□□□□□ -0.26
HPS3-207ENST00000494327 LINC01600Q96MT4 127 aa13.42□□□□□ -0.26
HPS3-207ENST00000494327 IGLV7-43P04211 117 aa13.41□□□□□ -0.26
HPS3-207ENST00000494327 PFN2P35080 140 aa13.41□□□□□ -0.26
HPS3-207ENST00000494327 C20orf202A1L168 122 aa13.39□□□□□ -0.27
HPS3-207ENST00000494327 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
HPS3-207ENST00000494327 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
HPS3-207ENST00000494327 LBHQ53QV2 105 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms