RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 CXCL5P42830 114 aa7.97□□□□□ -1.13
TRA2A-209ENST00000494255 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
TRA2A-209ENST00000494255 MAJINQ3KP22 176 aa7.97□□□□□ -1.13
TRA2A-209ENST00000494255 Q8N1X5 172 aa7.97□□□□□ -1.13
TRA2A-209ENST00000494255 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
TRA2A-209ENST00000494255 COX7B2Q8TF08 81 aa7.97□□□□□ -1.13
TRA2A-209ENST00000494255 A0A096LNI7 61 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 TRBV30A0A0K0K1B3 111 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 F8VRH5 84 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 PANO1I0J062 215 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.13
TRA2A-209ENST00000494255 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.13
TRA2A-209ENST00000494255 C10orf25Q5T742 122 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.13
TRA2A-209ENST00000494255 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 MAP1LC3CQ9BXW4 147 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 ODF1Q14990 250 aa7.95□□□□□ -1.14
TRA2A-209ENST00000494255 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
TRA2A-209ENST00000494255 A0A087WYN8 130 aa7.94□□□□□ -1.14
TRA2A-209ENST00000494255 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
TRA2A-209ENST00000494255 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
TRA2A-209ENST00000494255 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
TRA2A-209ENST00000494255 STPG4Q8N801 248 aa7.93□□□□□ -1.14
TRA2A-209ENST00000494255 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
TRA2A-209ENST00000494255 PLNP26678 52 aa7.92□□□□□ -1.14
TRA2A-209ENST00000494255 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
TRA2A-209ENST00000494255 PLAC8Q9NZF1 115 aa7.92□□□□□ -1.14
TRA2A-209ENST00000494255 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
TRA2A-209ENST00000494255 NDUFC2-KCTD14E9PQ53 114 aa7.91□□□□□ -1.14
TRA2A-209ENST00000494255 DPM2O94777 84 aa7.91□□□□□ -1.14
TRA2A-209ENST00000494255 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
TRA2A-209ENST00000494255 Q5VSD8 79 aa7.91□□□□□ -1.14
TRA2A-209ENST00000494255 GAGE2EQ4V326 116 aa7.9□□□□□ -1.14
TRA2A-209ENST00000494255 Q6ZRP5 223 aa7.9□□□□□ -1.14
TRA2A-209ENST00000494255 GAGE2DQ9UEU5 116 aa7.9□□□□□ -1.14
TRA2A-209ENST00000494255 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.14
TRA2A-209ENST00000494255 RYR1P21817 5038 aa7.9□□□□□ -1.15
TRA2A-209ENST00000494255 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
TRA2A-209ENST00000494255 IGKCP01834 107 aa7.89□□□□□ -1.15
TRA2A-209ENST00000494255 PMCHL2Q9BQD1 86 aa7.89□□□□□ -1.15
TRA2A-209ENST00000494255 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
TRA2A-209ENST00000494255 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
TRA2A-209ENST00000494255 SFTA2Q6UW10 78 aa7.89□□□□□ -1.15
TRA2A-209ENST00000494255 S100A6P06703 90 aa7.88□□□□□ -1.15
TRA2A-209ENST00000494255 HERVK_113P61574 105 aa7.88□□□□□ -1.15
TRA2A-209ENST00000494255 PET117Q6UWS5 81 aa7.88□□□□□ -1.15
TRA2A-209ENST00000494255 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
TRA2A-209ENST00000494255 HSPG2P98160 4391 aa7.88□□□□□ -1.15
TRA2A-209ENST00000494255 KRTDAPP60985 99 aa7.87□□□□□ -1.15
TRA2A-209ENST00000494255 C3orf79P0CE67 100 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 HERC2O95714 4834 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 S100A2P29034 98 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
TRA2A-209ENST00000494255 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
TRA2A-209ENST00000494255 LEPROTO15243 131 aa7.85□□□□□ -1.15
TRA2A-209ENST00000494255 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
TRA2A-209ENST00000494255 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
TRA2A-209ENST00000494255 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
TRA2A-209ENST00000494255 C20orf202A1L168 122 aa7.84□□□□□ -1.15
TRA2A-209ENST00000494255 PFN2P35080 140 aa7.84□□□□□ -1.15
TRA2A-209ENST00000494255 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.15
TRA2A-209ENST00000494255 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
TRA2A-209ENST00000494255 COX17Q14061 63 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
TRA2A-209ENST00000494255 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 HERV-K104P63124 156 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
TRA2A-209ENST00000494255 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
TRA2A-209ENST00000494255 J3QQQ9 107 aa7.82□□□□□ -1.16
TRA2A-209ENST00000494255 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
TRA2A-209ENST00000494255 HIST1H2BLQ99880 126 aa7.81□□□□□ -1.16
TRA2A-209ENST00000494255 M0QXV9 152 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 INAFM2P0DMQ5 153 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 AKR1D1P51857 326 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 LINC00158P58513 81 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 TSPEAR-AS2P59090 65 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 MEIG1Q5JSS6 88 aa7.8□□□□□ -1.16
TRA2A-209ENST00000494255 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
TRA2A-209ENST00000494255 LINC00587B1AMM8 73 aa7.79□□□□□ -1.16
TRA2A-209ENST00000494255 E9PLD3 99 aa7.79□□□□□ -1.16
TRA2A-209ENST00000494255 NMUP48645 174 aa7.79□□□□□ -1.16
TRA2A-209ENST00000494255 SNRPEP62304 92 aaKnown RBP7.79□□□□□ -1.16
TRA2A-209ENST00000494255 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
TRA2A-209ENST00000494255 A0A0U1RRA0 63 aa7.77□□□□□ -1.17
TRA2A-209ENST00000494255 SMIM13P0DJ93 91 aa7.77□□□□□ -1.17
TRA2A-209ENST00000494255 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
TRA2A-209ENST00000494255 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
TRA2A-209ENST00000494255 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
TRA2A-209ENST00000494255 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
TRA2A-209ENST00000494255 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
TRA2A-209ENST00000494255 C5orf52A6NGY3 159 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms