RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CXCL6P80162 114 aa8.27□□□□□ -1.09
BRCA1-222ENST00000493919 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.09
BRCA1-222ENST00000493919 MED14OSP0DP75 135 aa8.27□□□□□ -1.09
BRCA1-222ENST00000493919 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
BRCA1-222ENST00000493919 UBE2AP49459 152 aa8.26□□□□□ -1.09
BRCA1-222ENST00000493919 NRACQ8N912 160 aa8.26□□□□□ -1.09
BRCA1-222ENST00000493919 DNAH9Q9NYC9 4486 aa8.26□□□□□ -1.09
BRCA1-222ENST00000493919 COX7A2LO14548 114 aa8.25□□□□□ -1.09
BRCA1-222ENST00000493919 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
BRCA1-222ENST00000493919 SMAD5-AS1Q9Y6J3 95 aa8.25□□□□□ -1.09
BRCA1-222ENST00000493919 MIFP14174 115 aa8.25□□□□□ -1.09
BRCA1-222ENST00000493919 FXYD7P58549 80 aa8.25□□□□□ -1.09
BRCA1-222ENST00000493919 TGP01266 2768 aa8.24□□□□□ -1.09
BRCA1-222ENST00000493919 IGKV3D-7A0A0C4DH55 119 aa8.24□□□□□ -1.09
BRCA1-222ENST00000493919 DNAL4O96015 105 aa8.24□□□□□ -1.09
BRCA1-222ENST00000493919 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
BRCA1-222ENST00000493919 A0A087WVE0 104 aa8.23□□□□□ -1.09
BRCA1-222ENST00000493919 IGHV4-30-4P0DP06 118 aa8.23□□□□□ -1.09
BRCA1-222ENST00000493919 MP68P56378 58 aa8.23□□□□□ -1.09
BRCA1-222ENST00000493919 LINC00322Q6ZN03 302 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-222ENST00000493919 H7C2G1 150 aa8.23□□□□□ -1.09
BRCA1-222ENST00000493919 COX7A2P2O60397 106 aa8.23□□□□□ -1.09
BRCA1-222ENST00000493919 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-222ENST00000493919 A6NN06 94 aa8.22□□□□□ -1.09
BRCA1-222ENST00000493919 ERC2-IT1O76042 136 aa8.21□□□□□ -1.09
BRCA1-222ENST00000493919 PHLDA3Q9Y5J5 127 aa8.21□□□□□ -1.09
BRCA1-222ENST00000493919 COL7A1Q02388 2944 aa8.21□□□□□ -1.1
BRCA1-222ENST00000493919 H3BRN7 92 aa8.21□□□□□ -1.1
BRCA1-222ENST00000493919 ODF3L2Q3SX64 289 aa8.21□□□□□ -1.1
BRCA1-222ENST00000493919 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
BRCA1-222ENST00000493919 A0A0J9YX75 114 aa8.2□□□□□ -1.1
BRCA1-222ENST00000493919 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
BRCA1-222ENST00000493919 MAP6D1Q9H9H5 199 aa8.2□□□□□ -1.1
BRCA1-222ENST00000493919 H0Y9J4 135 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 SH2D1AO60880 128 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 LINC00313P59037 77 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 MORN5Q5VZ52 161 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 C10orf113Q5VZT2 155 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
BRCA1-222ENST00000493919 KLLNB2CW77 178 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
BRCA1-222ENST00000493919 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 K7EQG2 157 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
BRCA1-222ENST00000493919 DEFB131AP59861 70 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
BRCA1-222ENST00000493919 RMI2Q96E14 147 aa8.17□□□□□ -1.1
BRCA1-222ENST00000493919 IGLV2-18A0A075B6J9 118 aa8.17□□□□□ -1.1
BRCA1-222ENST00000493919 Q86TA4 180 aa8.17□□□□□ -1.1
BRCA1-222ENST00000493919 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
BRCA1-222ENST00000493919 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
BRCA1-222ENST00000493919 I3L3M4 83 aa8.16□□□□□ -1.1
BRCA1-222ENST00000493919 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
BRCA1-222ENST00000493919 LINC00269Q8N2A0 174 aa8.16□□□□□ -1.1
BRCA1-222ENST00000493919 LINC00337Q8N6G1 96 aa8.16□□□□□ -1.1
BRCA1-222ENST00000493919 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
BRCA1-222ENST00000493919 A0A087WZ39 114 aa8.15□□□□□ -1.1
BRCA1-222ENST00000493919 S100A4P26447 101 aaKnown RBP8.15□□□□□ -1.1
BRCA1-222ENST00000493919 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-222ENST00000493919 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
BRCA1-222ENST00000493919 NBEAL2Q6ZNJ1 2754 aa8.15□□□□□ -1.1
BRCA1-222ENST00000493919 C11orf86A6NJI1 115 aa8.15□□□□□ -1.11
BRCA1-222ENST00000493919 M0R3E3 92 aa8.15□□□□□ -1.11
BRCA1-222ENST00000493919 BAALC-AS2P0C853 105 aa8.15□□□□□ -1.11
BRCA1-222ENST00000493919 RNASE4P34096 147 aaKnown RBP8.15□□□□□ -1.11
BRCA1-222ENST00000493919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.11
BRCA1-222ENST00000493919 SOCS3O14543 225 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 DEFB1P60022 68 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 IGFL4Q6B9Z1 124 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 Q6ZRP5 223 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 ZNF575Q86XF7 245 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 AMELXQ99217 191 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
BRCA1-222ENST00000493919 TENM3Q9P273 2699 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
BRCA1-222ENST00000493919 PRB4P10163 310 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-222ENST00000493919 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
BRCA1-222ENST00000493919 OBSCN-AS1Q96MR7 158 aa8.11□□□□□ -1.11
BRCA1-222ENST00000493919 IGKV3-20P01619 116 aa8.11□□□□□ -1.11
BRCA1-222ENST00000493919 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
BRCA1-222ENST00000493919 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
BRCA1-222ENST00000493919 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-222ENST00000493919 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
BRCA1-222ENST00000493919 TRAV22A0A0B4J277 110 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 LEPROTO15243 131 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 Q6ZTC4 211 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 TRBV7-4A0A0J9YYF1 115 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 CYP4F30PQ9H0H9 118 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 TMEM14CQ9P0S9 112 aa8.09□□□□□ -1.11
BRCA1-222ENST00000493919 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
BRCA1-222ENST00000493919 C11orf72Q8NBR9 251 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms