RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CRIP3Q6Q6R5 217 aa5.53□□□□□ -1.52
BRCA1-221ENST00000493795 TMEM131Q92545 1883 aa5.53□□□□□ -1.52
BRCA1-221ENST00000493795 LINC00310P59036 64 aa5.53□□□□□ -1.52
BRCA1-221ENST00000493795 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
BRCA1-221ENST00000493795 EDN2P20800 178 aa5.52□□□□□ -1.53
BRCA1-221ENST00000493795 Q8NBF4 154 aa5.52□□□□□ -1.53
BRCA1-221ENST00000493795 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
BRCA1-221ENST00000493795 APLNQ9ULZ1 77 aa5.52□□□□□ -1.53
BRCA1-221ENST00000493795 LTBP1Q14766 1721 aa5.52□□□□□ -1.53
BRCA1-221ENST00000493795 CYP4F30PQ9H0H9 118 aa5.51□□□□□ -1.53
BRCA1-221ENST00000493795 Q6ZSN1 163 aa5.51□□□□□ -1.53
BRCA1-221ENST00000493795 UQCR11O14957 56 aa5.51□□□□□ -1.53
BRCA1-221ENST00000493795 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
BRCA1-221ENST00000493795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.533e-7■■■■■ 41.1
BRCA1-221ENST00000493795 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
BRCA1-221ENST00000493795 NHLRC4P0CG21 123 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-221ENST00000493795 C16orf95Q9H693 158 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 CNOT1A5YKK6 2376 aaKnown RBP5.49□□□□□ -1.53
BRCA1-221ENST00000493795 Q96NJ1 140 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 ARHGAP21Q5T5U3 1957 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 EPM2AB3EWF7 344 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
BRCA1-221ENST00000493795 COX8CQ7Z4L0 72 aa5.49□□□□□ -1.53
BRCA1-221ENST00000493795 NUP210Q8TEM1 1887 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-221ENST00000493795 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 LINC00476Q8WZB0 136 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 MDFIQ99750 246 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 TYMSOSQ8TAI1 123 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 Q6ZQT0 140 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
BRCA1-221ENST00000493795 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
BRCA1-221ENST00000493795 COA5Q86WW8 74 aa5.47□□□□□ -1.53
BRCA1-221ENST00000493795 A0A096LNJ9 63 aa5.47□□□□□ -1.53
BRCA1-221ENST00000493795 NCOA6Q14686 2063 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-221ENST00000493795 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
BRCA1-221ENST00000493795 TM2D3Q9BRN9 247 aa5.46□□□□□ -1.54
BRCA1-221ENST00000493795 PRRC2AP48634 2157 aaKnown RBP5.45□□□□□ -1.54
BRCA1-221ENST00000493795 TANC1Q9C0D5 1861 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 A8MUN3 132 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 Q6ZRX8 168 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 AVPP01185 164 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 RPL37AP61513 92 aaKnown RBP5.45□□□□□ -1.54
BRCA1-221ENST00000493795 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 ADAMTS9Q9P2N4 1935 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 Q6ZRP5 223 aa5.45□□□□□ -1.54
BRCA1-221ENST00000493795 PLXNB3Q9ULL4 1909 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 HIVEP2P31629 2446 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 CD164Q04900 197 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 FHL3Q13643 280 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 LINC01554Q52M75 96 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 SHANK1Q9Y566 2161 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 SMR3AQ99954 134 aa5.44□□□□□ -1.54
BRCA1-221ENST00000493795 A8MWP4 228 aa5.43□□□□□ -1.54
BRCA1-221ENST00000493795 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
BRCA1-221ENST00000493795 MRPL34Q9BQ48 92 aaKnown RBP5.43□□□□□ -1.54
BRCA1-221ENST00000493795 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
BRCA1-221ENST00000493795 FAM19A4Q96LR4 140 aa5.43□□□□□ -1.54
BRCA1-221ENST00000493795 CACNA1HO95180 2353 aa5.43□□□□□ -1.54
BRCA1-221ENST00000493795 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
BRCA1-221ENST00000493795 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 COL4A3Q01955 1670 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 PRR14LQ5THK1 2151 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 LINC01546A6NGU7 62 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
BRCA1-221ENST00000493795 LCA10Q71F78 164 aa5.42□□□□□ -1.54
BRCA1-221ENST00000493795 RTL8CO15255 209 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 ST20-AS1Q8NBB2 130 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 MGAMO43451 1857 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 SMCPP49901 116 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-221ENST00000493795 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 ANAPC1Q9H1A4 1944 aa5.41□□□□□ -1.54
BRCA1-221ENST00000493795 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
BRCA1-221ENST00000493795 PCNX1Q96RV3 2341 aa5.4□□□□□ -1.54
BRCA1-221ENST00000493795 DENND4CQ5VZ89 1909 aa5.4□□□□□ -1.54
BRCA1-221ENST00000493795 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.55
BRCA1-221ENST00000493795 ZNF106Q9H2Y7 1883 aaKnown RBP5.4□□□□□ -1.55
BRCA1-221ENST00000493795 C16orf90A8MZG2 172 aa5.4□□□□□ -1.55
BRCA1-221ENST00000493795 ALPK3Q96L96 1907 aa5.39□□□□□ -1.55
BRCA1-221ENST00000493795 J3QL48 77 aa5.39□□□□□ -1.55
BRCA1-221ENST00000493795 KIAA1549Q9HCM3 1950 aa5.39□□□□□ -1.55
BRCA1-221ENST00000493795 MED12LQ86YW9 2145 aa5.38□□□□□ -1.55
BRCA1-221ENST00000493795 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
BRCA1-221ENST00000493795 H3BNG1 76 aa5.38□□□□□ -1.55
BRCA1-221ENST00000493795 K7EQZ3 153 aa5.37□□□□□ -1.55
BRCA1-221ENST00000493795 NUP210LQ5VU65 1888 aa5.37□□□□□ -1.55
BRCA1-221ENST00000493795 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
BRCA1-221ENST00000493795 IGLV6-57P01721 117 aa5.37□□□□□ -1.55
BRCA1-221ENST00000493795 LINC00315P59091 139 aa5.36□□□□□ -1.55
BRCA1-221ENST00000493795 SORL1Q92673 2214 aa5.35□□□□□ -1.55
BRCA1-221ENST00000493795 MED13LQ71F56 2210 aa5.35□□□□□ -1.55
BRCA1-221ENST00000493795 PRO3102Q9H379 93 aa5.35□□□□□ -1.55
BRCA1-221ENST00000493795 DSCR10P59022 87 aa5.34□□□□□ -1.55
BRCA1-221ENST00000493795 KRTAP10-9P60411 292 aa5.34□□□□□ -1.55
BRCA1-221ENST00000493795 NBDYA0A0U1RRE5 68 aa5.34□□□□□ -1.55
BRCA1-221ENST00000493795 C2orf16Q68DN1 1984 aa5.34□□□□□ -1.55
BRCA1-221ENST00000493795 GVQW2A0A096LPI5 108 aaPredicted RBP5.34□□□□□ -1.56
BRCA1-221ENST00000493795 C8orf17Q9NRJ1 99 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms