RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 XGP55808 180 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 CKS1BP61024 79 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 MUC7Q8TAX7 377 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 FASNP49327 2511 aaKnown RBP6.68□□□□□ -1.34
NPHP3-209ENST00000493732 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 CCL18P55774 89 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 Q8NAQ8 132 aa6.68□□□□□ -1.34
NPHP3-209ENST00000493732 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
NPHP3-209ENST00000493732 PFN2P35080 140 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 LELP1Q5T871 98 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 DNAL4O96015 105 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
NPHP3-209ENST00000493732 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 MALP21145 153 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 REG3AQ06141 175 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 Q6Q795 121 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
NPHP3-209ENST00000493732 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-209ENST00000493732 A0A096LPF7 62 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 NDUFC2O95298 119 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 IGHV4-30-4P0DP06 118 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 GAGE2EQ4V326 116 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 GAGE2DQ9UEU5 116 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 SMIM11BQ8TCY0 68 aa6.64□□□□□ -1.35
NPHP3-209ENST00000493732 A0A1B0GX51 115 aa6.63□□□□□ -1.35
NPHP3-209ENST00000493732 H3BNG1 76 aa6.63□□□□□ -1.35
NPHP3-209ENST00000493732 DEFB4AO15263 64 aa6.63□□□□□ -1.35
NPHP3-209ENST00000493732 OR13C6PQ8NH95 151 aa6.63□□□□□ -1.35
NPHP3-209ENST00000493732 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
NPHP3-209ENST00000493732 FN1P02751 2386 aaKnown RBP6.62□□□□□ -1.35
NPHP3-209ENST00000493732 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
NPHP3-209ENST00000493732 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
NPHP3-209ENST00000493732 CUBNO60494 3623 aa6.62□□□□□ -1.35
NPHP3-209ENST00000493732 C15orf53Q8NAA6 179 aa6.62□□□□□ -1.35
NPHP3-209ENST00000493732 CELA1Q9UNI1 258 aa6.62□□□□□ -1.35
NPHP3-209ENST00000493732 NIPBLQ6KC79 2804 aaeCLIP6.61□□□□□ -1.35
NPHP3-209ENST00000493732 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
NPHP3-209ENST00000493732 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
NPHP3-209ENST00000493732 C11orf68Q9H3H3 251 aaKnown RBP6.61□□□□□ -1.35
NPHP3-209ENST00000493732 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
NPHP3-209ENST00000493732 HTN3P15516 51 aa6.6□□□□□ -1.35
NPHP3-209ENST00000493732 TTC32Q5I0X7 151 aa6.6□□□□□ -1.35
NPHP3-209ENST00000493732 NOTCH2Q04721 2471 aa6.6□□□□□ -1.35
NPHP3-209ENST00000493732 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
NPHP3-209ENST00000493732 NSD1Q96L73 2696 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-209ENST00000493732 IGLV10-54A0A075B6I4 117 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 A0A0J9YWU9 116 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 SPAG11BQ08648 103 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 OXLD1Q5BKU9 147 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 LYPD5Q6UWN5 251 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 ANAPC13Q9BS18 74 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 HECTD1Q9ULT8 2610 aa6.58□□□□□ -1.36
NPHP3-209ENST00000493732 GCN1Q92616 2671 aaKnown RBP6.57□□□□□ -1.36
NPHP3-209ENST00000493732 A0A087WYN8 130 aa6.57□□□□□ -1.36
NPHP3-209ENST00000493732 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
NPHP3-209ENST00000493732 TRBV7-7A0A0K0K1E9 115 aa6.57□□□□□ -1.36
NPHP3-209ENST00000493732 Q9HAA7 133 aa6.57□□□□□ -1.36
NPHP3-209ENST00000493732 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
NPHP3-209ENST00000493732 LECT2O14960 151 aa6.56□□□□□ -1.36
NPHP3-209ENST00000493732 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
NPHP3-209ENST00000493732 OTOGQ6ZRI0 2925 aa6.56□□□□□ -1.36
NPHP3-209ENST00000493732 EGFEM1PQ0D2K5 195 aa6.56□□□□□ -1.36
NPHP3-209ENST00000493732 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
NPHP3-209ENST00000493732 S100A7L2Q5SY68 101 aa6.55□□□□□ -1.36
NPHP3-209ENST00000493732 SDIM1Q6ZPB5 146 aa6.55□□□□□ -1.36
NPHP3-209ENST00000493732 OBSCN-AS1Q96MR7 158 aa6.55□□□□□ -1.36
NPHP3-209ENST00000493732 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
NPHP3-209ENST00000493732 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
NPHP3-209ENST00000493732 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
NPHP3-209ENST00000493732 H3BQ85 93 aa6.54□□□□□ -1.36
NPHP3-209ENST00000493732 TMEM256-PLSCR3K7ERE1 68 aa6.54□□□□□ -1.36
NPHP3-209ENST00000493732 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
NPHP3-209ENST00000493732 CYSRT1A8MQ03 144 aa6.54□□□□□ -1.36
NPHP3-209ENST00000493732 KPRPQ5T749 579 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-209ENST00000493732 F8WDY8 70 aa6.53□□□□□ -1.36
NPHP3-209ENST00000493732 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
NPHP3-209ENST00000493732 Q8N3U1 123 aa6.53□□□□□ -1.36
NPHP3-209ENST00000493732 Q8N814 137 aa6.53□□□□□ -1.36
NPHP3-209ENST00000493732 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
NPHP3-209ENST00000493732 UNQ6190/PRO20217Q6UXQ8 127 aa6.52□□□□□ -1.37
NPHP3-209ENST00000493732 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
NPHP3-209ENST00000493732 TEP1Q99973 2627 aaKnown RBP6.52□□□□□ -1.37
NPHP3-209ENST00000493732 GHRHP01286 108 aa6.52□□□□□ -1.37
NPHP3-209ENST00000493732 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
NPHP3-209ENST00000493732 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-209ENST00000493732 KRTAP10-11P60412 298 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 NBEAL2Q6ZNJ1 2754 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 HIVEP1P15822 2718 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 ATRQ13535 2644 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
NPHP3-209ENST00000493732 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
NPHP3-209ENST00000493732 C10orf25Q5T742 122 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms