RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
UPF3A-210ENST00000493727 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
UPF3A-210ENST00000493727 COX11Q9Y6N1 276 aa8.07□□□□□ -1.12
UPF3A-210ENST00000493727 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 F8VRH5 84 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 AKR1D1P51857 326 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 TM2D2Q9BX73 214 aa8.06□□□□□ -1.12
UPF3A-210ENST00000493727 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
UPF3A-210ENST00000493727 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 PSCAO43653 123 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 DPM2O94777 84 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 HERVK_113P63121 156 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 LINC00242Q5T6M2 205 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
UPF3A-210ENST00000493727 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 A0A087WTM6 91 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 INAFM2P0DMQ5 153 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 PLNP26678 52 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 LINC01545Q5VT33 79 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 CD164L2Q6UWJ8 174 aa8.04□□□□□ -1.12
UPF3A-210ENST00000493727 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
UPF3A-210ENST00000493727 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 H3BRM9 83 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 COX7A2LO14548 114 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 IGKCP01834 107 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 TMEM170BQ5T4T1 132 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 FAM19A3Q7Z5A8 133 aa8.03□□□□□ -1.12
UPF3A-210ENST00000493727 XGP55808 180 aa8.02□□□□□ -1.13
UPF3A-210ENST00000493727 COX6A2Q02221 97 aa8.02□□□□□ -1.13
UPF3A-210ENST00000493727 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
UPF3A-210ENST00000493727 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
UPF3A-210ENST00000493727 Q5VSD8 79 aa8.01□□□□□ -1.13
UPF3A-210ENST00000493727 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
UPF3A-210ENST00000493727 HERVK_113P61574 105 aa8□□□□□ -1.13
UPF3A-210ENST00000493727 ATOH7Q8N100 152 aa8□□□□□ -1.13
UPF3A-210ENST00000493727 NTN5Q8WTR8 489 aaPredicted RBP8□□□□□ -1.13
UPF3A-210ENST00000493727 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
UPF3A-210ENST00000493727 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
UPF3A-210ENST00000493727 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
UPF3A-210ENST00000493727 APOMO95445 188 aa7.99□□□□□ -1.13
UPF3A-210ENST00000493727 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
UPF3A-210ENST00000493727 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
UPF3A-210ENST00000493727 A0A087WZ39 114 aa7.98□□□□□ -1.13
UPF3A-210ENST00000493727 FUSP35637 526 aaKnown RBP eCLIP7.98□□□□□ -1.13
UPF3A-210ENST00000493727 JOSD1Q15040 202 aaPredicted RBP7.98□□□□□ -1.13
UPF3A-210ENST00000493727 CFAP161Q6P656 301 aa7.98□□□□□ -1.13
UPF3A-210ENST00000493727 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
UPF3A-210ENST00000493727 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 HSBP1L1C9JCN9 74 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 ORAOV1Q8WV07 137 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
UPF3A-210ENST00000493727 LOC105371267A0A1B0GV96 52 aa7.96□□□□□ -1.14
UPF3A-210ENST00000493727 TMEM223A0PJW6 202 aa7.96□□□□□ -1.14
UPF3A-210ENST00000493727 LECT2O14960 151 aa7.96□□□□□ -1.14
UPF3A-210ENST00000493727 PRSS2P07478 247 aa7.96□□□□□ -1.14
UPF3A-210ENST00000493727 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 SMIM1B2RUZ4 78 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 SPAG11BQ08648 103 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 C14orf177Q52M58 125 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
UPF3A-210ENST00000493727 LRP1Q07954 4544 aaKnown RBP7.94□□□□□ -1.14
UPF3A-210ENST00000493727 hDV102S1A0JD36 115 aa7.94□□□□□ -1.14
UPF3A-210ENST00000493727 LRCOL1A6NCL2 159 aa7.94□□□□□ -1.14
UPF3A-210ENST00000493727 STPG4Q8N801 248 aa7.94□□□□□ -1.14
UPF3A-210ENST00000493727 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
UPF3A-210ENST00000493727 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
UPF3A-210ENST00000493727 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
UPF3A-210ENST00000493727 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
UPF3A-210ENST00000493727 GVQW2A0A096LPI5 108 aaPredicted RBP7.92□□□□□ -1.14
UPF3A-210ENST00000493727 LEPROTO15243 131 aa7.92□□□□□ -1.14
UPF3A-210ENST00000493727 LGALS3P17931 250 aaKnown RBP7.92□□□□□ -1.14
UPF3A-210ENST00000493727 Q8N814 137 aa7.92□□□□□ -1.14
UPF3A-210ENST00000493727 PLEKHB2Q96CS7 222 aa7.92□□□□□ -1.14
UPF3A-210ENST00000493727 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 E9PLD3 99 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 NMUP48645 174 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 CKS1BP61024 79 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 WFDC2Q14508 124 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 MAJINQ3KP22 176 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 Q8IZM0 81 aa7.91□□□□□ -1.14
UPF3A-210ENST00000493727 J3QQQ9 107 aa7.9□□□□□ -1.14
UPF3A-210ENST00000493727 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
UPF3A-210ENST00000493727 SMIM6P0DI80 62 aa7.9□□□□□ -1.14
UPF3A-210ENST00000493727 S100A12P80511 92 aa7.9□□□□□ -1.14
UPF3A-210ENST00000493727 LINC00526Q96FQ7 95 aa7.9□□□□□ -1.14
UPF3A-210ENST00000493727 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
UPF3A-210ENST00000493727 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-210ENST00000493727 CXCL5P42830 114 aa7.89□□□□□ -1.15
UPF3A-210ENST00000493727 SPATA45Q537H7 98 aa7.89□□□□□ -1.15
UPF3A-210ENST00000493727 CAMK2N2Q96S95 79 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms