RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SCGB1D1O95968 90 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 CXCL5P42830 114 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 C6orf226Q5I0X4 101 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 Q8N814 137 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
SNX17-208ENST00000493711 LECT2O14960 151 aa8.16□□□□□ -1.1
SNX17-208ENST00000493711 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
SNX17-208ENST00000493711 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
SNX17-208ENST00000493711 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
SNX17-208ENST00000493711 HSBP1L1C9JCN9 74 aa8.15□□□□□ -1.1
SNX17-208ENST00000493711 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
SNX17-208ENST00000493711 JOSD1Q15040 202 aaPredicted RBP8.15□□□□□ -1.1
SNX17-208ENST00000493711 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
SNX17-208ENST00000493711 NDUFA1O15239 70 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 LEPROTO15243 131 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 CKS1BP61024 79 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 WFDC2Q14508 124 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
SNX17-208ENST00000493711 E9PLD3 99 aa8.13□□□□□ -1.11
SNX17-208ENST00000493711 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
SNX17-208ENST00000493711 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
SNX17-208ENST00000493711 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
SNX17-208ENST00000493711 NMUP48645 174 aa8.12□□□□□ -1.11
SNX17-208ENST00000493711 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
SNX17-208ENST00000493711 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
SNX17-208ENST00000493711 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
SNX17-208ENST00000493711 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.1□□□□□ -1.11
SNX17-208ENST00000493711 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 J3QQQ9 107 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 HERV-K104P63124 156 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 STPG4Q8N801 248 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
SNX17-208ENST00000493711 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
SNX17-208ENST00000493711 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
SNX17-208ENST00000493711 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
SNX17-208ENST00000493711 KRTAP4-8A0A0G2JLE6 195 aa8.08□□□□□ -1.12
SNX17-208ENST00000493711 Q6ZRU5 148 aa8.08□□□□□ -1.12
SNX17-208ENST00000493711 C9orf163Q8N9P6 203 aa8.08□□□□□ -1.12
SNX17-208ENST00000493711 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
SNX17-208ENST00000493711 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
SNX17-208ENST00000493711 DNAH10Q8IVF4 4471 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 SLPIP03973 132 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
SNX17-208ENST00000493711 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
SNX17-208ENST00000493711 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 LOC105371267A0A1B0GV96 52 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 KRTAP10-2P60368 255 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 S100A12P80511 92 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 COX17Q14061 63 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 ANKRD39Q53RE8 183 aa8.05□□□□□ -1.12
SNX17-208ENST00000493711 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 GCSHP23434 173 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 TSPEAR-AS2P59090 65 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
SNX17-208ENST00000493711 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
SNX17-208ENST00000493711 IGKV2D-26A0A0A0MRZ7 120 aa8.03□□□□□ -1.12
SNX17-208ENST00000493711 ZNF815PA8K554 130 aa8.03□□□□□ -1.12
SNX17-208ENST00000493711 CIRBPQ14011 172 aaKnown RBP8.03□□□□□ -1.12
SNX17-208ENST00000493711 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
SNX17-208ENST00000493711 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
SNX17-208ENST00000493711 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
SNX17-208ENST00000493711 SPATA45Q537H7 98 aa8.02□□□□□ -1.13
SNX17-208ENST00000493711 MEIG1Q5JSS6 88 aa8.02□□□□□ -1.13
SNX17-208ENST00000493711 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
SNX17-208ENST00000493711 C16orf90A8MZG2 172 aa8.01□□□□□ -1.13
SNX17-208ENST00000493711 PAM16Q9Y3D7 125 aa8.01□□□□□ -1.13
SNX17-208ENST00000493711 DNAH2Q9P225 4427 aa8□□□□□ -1.13
SNX17-208ENST00000493711 DLEU1O43261 78 aa8□□□□□ -1.13
SNX17-208ENST00000493711 TIMM17BO60830 172 aa8□□□□□ -1.13
SNX17-208ENST00000493711 LINC00158P58513 81 aa8□□□□□ -1.13
SNX17-208ENST00000493711 SCGB1D4Q6XE38 83 aa8□□□□□ -1.13
SNX17-208ENST00000493711 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
SNX17-208ENST00000493711 COX8AP10176 69 aa7.99□□□□□ -1.13
SNX17-208ENST00000493711 PFN2P35080 140 aa7.99□□□□□ -1.13
SNX17-208ENST00000493711 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
SNX17-208ENST00000493711 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
SNX17-208ENST00000493711 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
SNX17-208ENST00000493711 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
SNX17-208ENST00000493711 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
SNX17-208ENST00000493711 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
SNX17-208ENST00000493711 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
SNX17-208ENST00000493711 TMEM238C9JI98 176 aa7.97□□□□□ -1.13
SNX17-208ENST00000493711 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
SNX17-208ENST00000493711 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
SNX17-208ENST00000493711 Q6ZRP5 223 aa7.97□□□□□ -1.13
SNX17-208ENST00000493711 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
SNX17-208ENST00000493711 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms