RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 UBE2D4Q9Y2X8 147 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 C22orf24Q9Y442 160 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 XKRY2A2RUG3 117 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 F2Z2F3 143 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 SMLR1H3BR10 107 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 M0R2T5 61 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 BCE1O60756 84 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 UPK1BO75841 260 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 S100A9P06702 114 aaKnown RBP2.4□□□□□ -2.03
CLIP4-212ENST00000493551 CTRLP40313 264 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 GNG4P50150 75 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 RPL39P62891 51 aaKnown RBP2.4□□□□□ -2.03
CLIP4-212ENST00000493551 CCL20P78556 96 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 PRLHP81277 87 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 ASB16-AS1Q495Z4 193 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 SMIM15Q7Z3B0 74 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 DAND5Q8N907 189 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 MED28Q9H204 178 aa2.4□□□□□ -2.03
CLIP4-212ENST00000493551 TRBV20OR9-2A0A075B6H5 130 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 ARPC5O15511 151 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 MRPL52Q86TS9 123 aaKnown RBP2.39□□□□□ -2.03
CLIP4-212ENST00000493551 AMN1Q8IY45 258 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 PACRGQ96M98 296 aaPredicted RBP2.39□□□□□ -2.03
CLIP4-212ENST00000493551 TCEAL7Q9BRU2 100 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 BATF3Q9NR55 127 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 CYTL1Q9NRR1 136 aa2.39□□□□□ -2.03
CLIP4-212ENST00000493551 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 NDUFC2-KCTD14E9PQ53 114 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
CLIP4-212ENST00000493551 NUPR1O60356 82 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 MRPL55Q7Z7F7 128 aaKnown RBP2.38□□□□□ -2.03
CLIP4-212ENST00000493551 C9orf62Q8N4C0 152 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
CLIP4-212ENST00000493551 TGIF2-C20orf24A0A0A6YYL0 155 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 ZNF727A8MUV8 499 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 K7EN84 100 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 CEBPGP53567 150 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 RPL32P62910 135 aaKnown RBP2.37□□□□□ -2.03
CLIP4-212ENST00000493551 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 TMEM241Q24JQ0 296 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 LBHQ53QV2 105 aaPredicted RBP2.37□□□□□ -2.03
CLIP4-212ENST00000493551 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 C11orf52Q96A22 123 aa2.37□□□□□ -2.03
CLIP4-212ENST00000493551 IGLV8-61A0A075B6I0 122 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 TRBV27A0A0K0K1C4 114 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 TMEM238C9JI98 176 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 VCYO14598 125 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 TCAPO15273 167 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 GATCO43716 136 aaKnown RBP2.36□□□□□ -2.03
CLIP4-212ENST00000493551 RAB4AP20338 218 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 POLR2KP53803 58 aaKnown RBP2.36□□□□□ -2.03
CLIP4-212ENST00000493551 RAB5BP61020 215 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 CKS1BP61024 79 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 HBBP68871 147 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 PNRC1Q12796 327 aaPredicted RBP2.36□□□□□ -2.03
CLIP4-212ENST00000493551 PCOTHQ58A44 107 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 Q8NBF4 154 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 MBD3L1Q8WWY6 194 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 S100ZQ8WXG8 99 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 BORCS7Q96B45 105 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
CLIP4-212ENST00000493551 TRBV30A0A0K0K1B3 111 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 FAM229BQ4G0N7 80 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 TEX261Q6UWH6 196 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 FAM231DQ6ZW35 169 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 SVIPQ8NHG7 77 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 OCC1Q8TAD7 63 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 KIR2DL4Q99706 377 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 MANBALQ9NQG1 85 aa2.35□□□□□ -2.03
CLIP4-212ENST00000493551 C9orf92A6NGG3 77 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 F8WDY8 70 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 SMAGPQ0VAQ4 97 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 C6orf226Q5I0X4 101 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 COX6B2Q6YFQ2 88 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
CLIP4-212ENST00000493551 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
CLIP4-212ENST00000493551 ALKBH7Q9BT30 221 aaPredicted RBP2.34□□□□□ -2.03
CLIP4-212ENST00000493551 CSDC2Q9Y534 153 aaKnown RBP2.34□□□□□ -2.03
CLIP4-212ENST00000493551 IGLV4-3A0A075B6K6 122 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 IGLV9-49A0A0B4J1Y8 123 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 A0A1B0GUT8 65 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 HIGD1CA8MV81 97 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 A8MWL6 223 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 UMAD1C9J7I0 102 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
CLIP4-212ENST00000493551 CBLN2Q8IUK8 224 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 TIMM21Q9BVV7 248 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 TMEM191AQ9H0A3 160 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 BIN3Q9NQY0 253 aa2.33□□□□□ -2.04
CLIP4-212ENST00000493551 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms