RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NPYP01303 97 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 SMIM17P0DL12 118 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 FGF6P10767 208 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 PFN2P35080 140 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 RPL23P62829 140 aaKnown RBP1.7□□□□□ -2.14
PTCD3-218ENST00000493430 ADIRFQ15847 76 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 TAL2Q16559 108 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 IQCJQ1A5X6 159 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 MRPL51Q4U2R6 128 aaKnown RBP1.7□□□□□ -2.14
PTCD3-218ENST00000493430 MRPL55Q7Z7F7 128 aaKnown RBP1.7□□□□□ -2.14
PTCD3-218ENST00000493430 C5orf38Q86SI9 138 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 SPACA4Q8TDM5 124 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 SMIM7Q9BQ49 75 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 DPH3P1Q9H4G8 78 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 VAX2Q9UIW0 290 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 V9GYV3 84 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 TRAV1-1A0A0B4J248 108 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 TRBV10-1A0A0K0K1A3 114 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 HIGD1CA8MV81 97 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 H7C1H1 209 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 UBE2L6O14933 153 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 SCO1O75880 301 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 APCSP02743 223 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 CXCL1P09341 107 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 MIAQ16674 131 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 C5orf47Q569G3 176 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
PTCD3-218ENST00000493430 AMMECR1LQ6DCA0 310 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 SDIM1Q6ZPB5 146 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 Q6ZRU5 148 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 PHF5AQ7RTV0 110 aaKnown RBP1.69□□□□□ -2.14
PTCD3-218ENST00000493430 LINC01551Q86U37 167 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 SLC51BQ86UW2 128 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 NUP35Q8NFH5 326 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 EIF5A2Q9GZV4 153 aaKnown RBP1.69□□□□□ -2.14
PTCD3-218ENST00000493430 NIT2Q9NQR4 276 aa1.69□□□□□ -2.14
PTCD3-218ENST00000493430 IGLV4-69A0A075B6H9 119 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 A0A087WWC5 75 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 TRAV13-1A0A0B4J241 112 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 IGHV3OR16-9A0A0B4J2B5 98 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 LOC389332A0A1B0GUA5 103 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 F2Z2F3 143 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 S100A6P06703 90 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 TRGC1P0CF51 173 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 ESDP10768 282 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 ADCYAP1P18509 176 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 HERVK_113P61574 105 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 CACNG7P62955 275 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 PRR3P79522 188 aaKnown RBP1.68□□□□□ -2.14
PTCD3-218ENST00000493430 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 LINC00173Q6ZV60 143 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 FAM19A5Q7Z5A7 132 aaPredicted RBP1.68□□□□□ -2.14
PTCD3-218ENST00000493430 FAM210AQ96ND0 272 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 IMMP2LQ96T52 175 aa1.68□□□□□ -2.14
PTCD3-218ENST00000493430 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
PTCD3-218ENST00000493430 IGHV3-64A0A075B6Q5 118 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 A0A1B0GUT8 65 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 D6R8Y8 96 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 I3L3M4 83 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 PDE6DO43924 150 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 POLR2KP53803 58 aaKnown RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 RPS20P60866 119 aaKnown RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 SPAG11BQ08648 103 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 Q0VG73 95 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 CIRBPQ14011 172 aaKnown RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 UNQ6190/PRO20217Q6UXQ8 127 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 MRPL52Q86TS9 123 aaKnown RBP1.67□□□□□ -2.14
PTCD3-218ENST00000493430 OR5A1Q8NGJ0 315 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 ORAOV1Q8WV07 137 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 RMI2Q96E14 147 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 DPH3Q96FX2 82 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 MRAP2Q96G30 205 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 TMEM101Q96IK0 257 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 CARD19Q96LW7 228 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 CNFNQ9BYD5 112 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 ST20Q9HBF5 79 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 C6orf48Q9UBA6 75 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 UBE2D4Q9Y2X8 147 aa1.67□□□□□ -2.14
PTCD3-218ENST00000493430 A0A1B0GXF2 115 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 C7orf77A4D0Y5 90 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 CNBPP62633 177 aaKnown RBP1.66□□□□□ -2.14
PTCD3-218ENST00000493430 EIF5AP63241 154 aaKnown RBP1.66□□□□□ -2.14
PTCD3-218ENST00000493430 IFITM2Q01629 132 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 ELOBQ15370 118 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 PMCHL1Q16048 86 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 FAM104BQ5XKR9 115 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 FAM231DQ6ZW35 169 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 FAM19A1Q7Z5A9 133 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 ZNF664Q8N3J9 261 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 Q8NDZ9 215 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 TSKUQ8WUA8 353 aa1.66□□□□□ -2.14
PTCD3-218ENST00000493430 TCEAL7Q9BRU2 100 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms