RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-206ENST00000492796 PRSS2P07478 247 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 PDZD11Q5EBL8 140 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 CHCHD1Q96BP2 118 aaKnown RBP6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
CDC42SE1-206ENST00000492796 ATP5LO75964 103 aa6.71□□□□□ -1.34
CDC42SE1-206ENST00000492796 C10orf25Q5T742 122 aa6.71□□□□□ -1.34
CDC42SE1-206ENST00000492796 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
CDC42SE1-206ENST00000492796 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
CDC42SE1-206ENST00000492796 CXCL5P42830 114 aa6.7□□□□□ -1.34
CDC42SE1-206ENST00000492796 CKS1BP61024 79 aa6.7□□□□□ -1.34
CDC42SE1-206ENST00000492796 PMCHL1Q16048 86 aa6.7□□□□□ -1.34
CDC42SE1-206ENST00000492796 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
CDC42SE1-206ENST00000492796 H3BRM9 83 aa6.69□□□□□ -1.34
CDC42SE1-206ENST00000492796 TRGC2P03986 189 aa6.69□□□□□ -1.34
CDC42SE1-206ENST00000492796 IGLC3P0DOY3 106 aa6.69□□□□□ -1.34
CDC42SE1-206ENST00000492796 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
CDC42SE1-206ENST00000492796 Q6ZRP5 223 aa6.69□□□□□ -1.34
CDC42SE1-206ENST00000492796 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-206ENST00000492796 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
CDC42SE1-206ENST00000492796 F8VRH5 84 aa6.68□□□□□ -1.34
CDC42SE1-206ENST00000492796 NDUFA6P56556 154 aa6.68□□□□□ -1.34
CDC42SE1-206ENST00000492796 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
CDC42SE1-206ENST00000492796 COLCA2A8K830 154 aa6.67□□□□□ -1.34
CDC42SE1-206ENST00000492796 HSBP1O75506 76 aa6.67□□□□□ -1.34
CDC42SE1-206ENST00000492796 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
CDC42SE1-206ENST00000492796 C9orf116Q5BN46 136 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE1-206ENST00000492796 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
CDC42SE1-206ENST00000492796 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
CDC42SE1-206ENST00000492796 PRR3P79522 188 aaKnown RBP6.66□□□□□ -1.34
CDC42SE1-206ENST00000492796 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
CDC42SE1-206ENST00000492796 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
CDC42SE1-206ENST00000492796 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 TRAV12-1A0A0B4J245 112 aa6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 HNRNPA3P51991 378 aaKnown RBP6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.34
CDC42SE1-206ENST00000492796 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.35
CDC42SE1-206ENST00000492796 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
CDC42SE1-206ENST00000492796 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE1-206ENST00000492796 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
CDC42SE1-206ENST00000492796 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
CDC42SE1-206ENST00000492796 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
CDC42SE1-206ENST00000492796 SERF1AO75920 110 aa6.63□□□□□ -1.35
CDC42SE1-206ENST00000492796 OXTP01178 125 aa6.63□□□□□ -1.35
CDC42SE1-206ENST00000492796 FAM19A5Q7Z5A7 132 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE1-206ENST00000492796 FAM19A2Q8N3H0 131 aa6.63□□□□□ -1.35
CDC42SE1-206ENST00000492796 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 LEPROTL1O95214 131 aa6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 LINC00310P59036 64 aa6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 PHF5AQ7RTV0 110 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-206ENST00000492796 SCO1O75880 301 aa6.61□□□□□ -1.35
CDC42SE1-206ENST00000492796 ODF1Q14990 250 aa6.61□□□□□ -1.35
CDC42SE1-206ENST00000492796 M0QXV9 152 aa6.6□□□□□ -1.35
CDC42SE1-206ENST00000492796 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
CDC42SE1-206ENST00000492796 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
CDC42SE1-206ENST00000492796 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
CDC42SE1-206ENST00000492796 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
CDC42SE1-206ENST00000492796 XAGE1AQ9HD64 81 aa6.59□□□□□ -1.35
CDC42SE1-206ENST00000492796 PSORS1C2Q9UIG4 136 aa6.59□□□□□ -1.35
CDC42SE1-206ENST00000492796 NUPR1O60356 82 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 UBE2BP63146 152 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 COX17Q14061 63 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BHQ93079 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BNQ99877 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 HIST1H2BMQ99879 126 aa6.58□□□□□ -1.36
CDC42SE1-206ENST00000492796 H0Y8G0 127 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
CDC42SE1-206ENST00000492796 PLNP26678 52 aa6.56□□□□□ -1.36
CDC42SE1-206ENST00000492796 SRSF9Q13242 221 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDC42SE1-206ENST00000492796 LBHQ53QV2 105 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-206ENST00000492796 ZNF625Q96I27 306 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-206ENST00000492796 C22orf24Q9Y442 160 aa6.56□□□□□ -1.36
CDC42SE1-206ENST00000492796 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
CDC42SE1-206ENST00000492796 FABP4P15090 132 aa6.55□□□□□ -1.36
CDC42SE1-206ENST00000492796 PFN2P35080 140 aa6.55□□□□□ -1.36
CDC42SE1-206ENST00000492796 REG3GQ6UW15 175 aa6.55□□□□□ -1.36
CDC42SE1-206ENST00000492796 MAP1LC3CQ9BXW4 147 aa6.55□□□□□ -1.36
CDC42SE1-206ENST00000492796 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
CDC42SE1-206ENST00000492796 IGLV5-37A0A075B6J1 123 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms