RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PRO1933Q9H354 126 aa9□□□□□ -0.97
PTPRE-210ENST00000492479 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
PTPRE-210ENST00000492479 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
PTPRE-210ENST00000492479 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
PTPRE-210ENST00000492479 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
PTPRE-210ENST00000492479 HYDINQ4G0P3 5121 aa8.98□□□□□ -0.97
PTPRE-210ENST00000492479 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
PTPRE-210ENST00000492479 M0R2N4 97 aa8.98□□□□□ -0.97
PTPRE-210ENST00000492479 PSCAO43653 123 aa8.98□□□□□ -0.97
PTPRE-210ENST00000492479 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
PTPRE-210ENST00000492479 DNAH17Q9UFH2 4485 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 LINC00587B1AMM8 73 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 CKS1BP61024 79 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 LITAFQ99732 161 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 SPANXB1Q9NS25 103 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-210ENST00000492479 TP73-AS1Q9UF72 201 aa8.97□□□□□ -0.97
PTPRE-210ENST00000492479 DDTP30046 118 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.98
PTPRE-210ENST00000492479 COX17Q14061 63 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 WFDC2Q14508 124 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 RNF151Q2KHN1 245 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.98
PTPRE-210ENST00000492479 RYR2Q92736 4967 aa8.95□□□□□ -0.98
PTPRE-210ENST00000492479 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
PTPRE-210ENST00000492479 C2orf82Q6UX34 121 aa8.95□□□□□ -0.98
PTPRE-210ENST00000492479 SCGB1D4Q6XE38 83 aa8.95□□□□□ -0.98
PTPRE-210ENST00000492479 Q6ZVH6 145 aa8.95□□□□□ -0.98
PTPRE-210ENST00000492479 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 HNRNPA3P51991 378 aaKnown RBP8.94□□□□□ -0.98
PTPRE-210ENST00000492479 PTTG1IPP53801 180 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 TAL2Q16559 108 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 UNQ6190/PRO20217Q6UXQ8 127 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
PTPRE-210ENST00000492479 SLPIP03973 132 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 C10orf25Q5T742 122 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 CAMK2N2Q96S95 79 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 C6orf48Q9UBA6 75 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
PTPRE-210ENST00000492479 KMT2CQ8NEZ4 4911 aaKnown RBP8.92□□□□□ -0.98
PTPRE-210ENST00000492479 A0A087WTM6 91 aa8.92□□□□□ -0.98
PTPRE-210ENST00000492479 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
PTPRE-210ENST00000492479 Q6ZRU5 148 aa8.92□□□□□ -0.98
PTPRE-210ENST00000492479 LINC00526Q96FQ7 95 aa8.92□□□□□ -0.98
PTPRE-210ENST00000492479 LOC107984156A0A0G2JMH3 177 aa8.91□□□□□ -0.98
PTPRE-210ENST00000492479 RTL8CO15255 209 aa8.91□□□□□ -0.98
PTPRE-210ENST00000492479 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
PTPRE-210ENST00000492479 HSD52Q0P140 79 aa8.91□□□□□ -0.98
PTPRE-210ENST00000492479 ARL17AQ8IVW1 177 aa8.91□□□□□ -0.98
PTPRE-210ENST00000492479 LECT2O14960 151 aa8.9□□□□□ -0.98
PTPRE-210ENST00000492479 IFITM1P13164 125 aa8.9□□□□□ -0.98
PTPRE-210ENST00000492479 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
PTPRE-210ENST00000492479 Q8N814 137 aa8.9□□□□□ -0.98
PTPRE-210ENST00000492479 CARD19Q96LW7 228 aa8.9□□□□□ -0.98
PTPRE-210ENST00000492479 SMIM13P0DJ93 91 aa8.89□□□□□ -0.99
PTPRE-210ENST00000492479 GCSHP23434 173 aa8.89□□□□□ -0.99
PTPRE-210ENST00000492479 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
PTPRE-210ENST00000492479 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
PTPRE-210ENST00000492479 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-210ENST00000492479 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
PTPRE-210ENST00000492479 CTAG1AP78358 180 aa8.87□□□□□ -0.99
PTPRE-210ENST00000492479 COPS9Q8WXC6 57 aa8.87□□□□□ -0.99
PTPRE-210ENST00000492479 HECTD4Q9Y4D8 3996 aa8.87□□□□□ -0.99
PTPRE-210ENST00000492479 C9orf116Q5BN46 136 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-210ENST00000492479 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
PTPRE-210ENST00000492479 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
PTPRE-210ENST00000492479 LINC00308Q8TCZ7 52 aa8.86□□□□□ -0.99
PTPRE-210ENST00000492479 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
PTPRE-210ENST00000492479 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
PTPRE-210ENST00000492479 PFN2P35080 140 aa8.85□□□□□ -0.99
PTPRE-210ENST00000492479 LINC00158P58513 81 aa8.85□□□□□ -0.99
PTPRE-210ENST00000492479 TNP2Q05952 138 aa8.85□□□□□ -0.99
PTPRE-210ENST00000492479 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRE-210ENST00000492479 CEND1Q8N111 149 aa8.85□□□□□ -0.99
PTPRE-210ENST00000492479 DNAH11Q96DT5 4516 aa8.84□□□□□ -0.99
PTPRE-210ENST00000492479 M0R143 59 aa8.84□□□□□ -0.99
PTPRE-210ENST00000492479 LINC00336Q6ZUF6 198 aa8.84□□□□□ -0.99
PTPRE-210ENST00000492479 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
PTPRE-210ENST00000492479 EREGO14944 169 aa8.83□□□□□ -1
PTPRE-210ENST00000492479 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
PTPRE-210ENST00000492479 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
PTPRE-210ENST00000492479 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
PTPRE-210ENST00000492479 LOC107984640A0A0U1RRK4 108 aa8.82□□□□□ -1
PTPRE-210ENST00000492479 RPL24P83731 157 aaKnown RBP8.82□□□□□ -1
PTPRE-210ENST00000492479 Q6ZRP5 223 aa8.82□□□□□ -1
PTPRE-210ENST00000492479 MUSTN1Q8IVN3 82 aa8.82□□□□□ -1
PTPRE-210ENST00000492479 DAND5Q8N907 189 aa8.82□□□□□ -1
PTPRE-210ENST00000492479 A0A0U1RRA0 63 aa8.81□□□□□ -1
PTPRE-210ENST00000492479 A0A1B0GWB2 263 aa8.81□□□□□ -1
PTPRE-210ENST00000492479 EIF4EBP3O60516 100 aaPredicted RBP8.81□□□□□ -1
PTPRE-210ENST00000492479 NDUFC2O95298 119 aa8.81□□□□□ -1
PTPRE-210ENST00000492479 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.8□□□□□ -1
PTPRE-210ENST00000492479 TMEM238LA0A1B0GVL6 79 aa8.8□□□□□ -1
PTPRE-210ENST00000492479 A6NJY4 79 aa8.8□□□□□ -1
PTPRE-210ENST00000492479 FXYD2P54710 66 aa8.8□□□□□ -1
PTPRE-210ENST00000492479 C16orf90A8MZG2 172 aa8.79□□□□□ -1
PTPRE-210ENST00000492479 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms