RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NAT8BQ9UHF3 227 aa8.01□□□□□ -1.13
USF1-206ENST00000491629 V9GYV3 84 aa8.01□□□□□ -1.13
USF1-206ENST00000491629 H7C423 109 aa8□□□□□ -1.13
USF1-206ENST00000491629 NCR2O95944 276 aa8□□□□□ -1.13
USF1-206ENST00000491629 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
USF1-206ENST00000491629 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
USF1-206ENST00000491629 OCC1Q8TAD7 63 aa8□□□□□ -1.13
USF1-206ENST00000491629 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 HSBP1O75506 76 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 APCSP02743 223 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 CAMPP49913 170 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
USF1-206ENST00000491629 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
USF1-206ENST00000491629 CNFNQ9BYD5 112 aa7.99□□□□□ -1.13
USF1-206ENST00000491629 IGLV4-69A0A075B6H9 119 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.98□□□□□ -1.13
USF1-206ENST00000491629 COX8AP10176 69 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 NUP35Q8NFH5 326 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
USF1-206ENST00000491629 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 GNG4P50150 75 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 TWIST1Q15672 202 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
USF1-206ENST00000491629 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
USF1-206ENST00000491629 TSHBP01222 138 aa7.96□□□□□ -1.14
USF1-206ENST00000491629 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
USF1-206ENST00000491629 CDC42SE2Q9NRR3 84 aa7.96□□□□□ -1.14
USF1-206ENST00000491629 A0A1W2PPM0 123 aa7.95□□□□□ -1.14
USF1-206ENST00000491629 K7EN84 100 aa7.95□□□□□ -1.14
USF1-206ENST00000491629 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
USF1-206ENST00000491629 H0Y9J4 135 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 APOMO95445 188 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 SS18Q15532 418 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 FAM231DQ6ZW35 169 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
USF1-206ENST00000491629 OPRPNQ99935 248 aaPredicted RBP7.94□□□□□ -1.14
USF1-206ENST00000491629 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
USF1-206ENST00000491629 TRBV6-5A0A0K0K1A5 114 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 F8W1H4 67 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 I3L3M4 83 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 FABP2P12104 132 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 SMAGPQ0VAQ4 97 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 PRR4Q16378 134 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 ERASQ7Z444 233 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 RNASE7Q9H1E1 156 aaKnown RBP7.93□□□□□ -1.14
USF1-206ENST00000491629 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
USF1-206ENST00000491629 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
USF1-206ENST00000491629 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
USF1-206ENST00000491629 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
USF1-206ENST00000491629 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
USF1-206ENST00000491629 CAMK2N2Q96S95 79 aa7.92□□□□□ -1.14
USF1-206ENST00000491629 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
USF1-206ENST00000491629 IGLV1-50A0A075B6I6 118 aa7.91□□□□□ -1.14
USF1-206ENST00000491629 POLR2KP53803 58 aaKnown RBP7.91□□□□□ -1.14
USF1-206ENST00000491629 MAP1LC3CQ9BXW4 147 aa7.91□□□□□ -1.14
USF1-206ENST00000491629 VCX2Q9H322 139 aa7.91□□□□□ -1.14
USF1-206ENST00000491629 RPP21Q9H633 154 aaKnown RBP7.91□□□□□ -1.14
USF1-206ENST00000491629 COX7A2LO14548 114 aa7.9□□□□□ -1.14
USF1-206ENST00000491629 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
USF1-206ENST00000491629 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
USF1-206ENST00000491629 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
USF1-206ENST00000491629 H3BUT2 72 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 KIAA1644Q3SXP7 199 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 C5orf38Q86SI9 138 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 CYSLTR1Q9Y271 337 aa7.89□□□□□ -1.15
USF1-206ENST00000491629 A0A087WZ39 114 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 MALP21145 153 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 HIGD1BQ9P298 99 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
USF1-206ENST00000491629 TRBV27A0A0K0K1C4 114 aa7.87□□□□□ -1.15
USF1-206ENST00000491629 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
USF1-206ENST00000491629 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
USF1-206ENST00000491629 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
USF1-206ENST00000491629 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
USF1-206ENST00000491629 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
USF1-206ENST00000491629 CT83Q5H943 113 aa7.86□□□□□ -1.15
USF1-206ENST00000491629 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
USF1-206ENST00000491629 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
USF1-206ENST00000491629 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
USF1-206ENST00000491629 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
USF1-206ENST00000491629 Q6ZUT4 128 aa7.84□□□□□ -1.15
USF1-206ENST00000491629 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
USF1-206ENST00000491629 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.15
USF1-206ENST00000491629 E9PLD3 99 aa7.83□□□□□ -1.16
USF1-206ENST00000491629 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms