RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 DSCR8Q96T75 97 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 NOTCH3Q9UM47 2321 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 CEP290O15078 2479 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 IGHV3-73A0A0B4J1V6 119 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 LECT2O14960 151 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 TLX1NBP0CAT3 122 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 PRB3Q04118 309 aaPredicted RBP3.14□□□□□ -1.91
RTN4-215ENST00000491592 Q6JHZ5 121 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 SERP2Q8N6R1 65 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 LINC01560Q8TB33 94 aa3.14□□□□□ -1.91
RTN4-215ENST00000491592 ABCA4P78363 2273 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 ROS1P08922 2347 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 LYNX1G3V0Z9 82 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 BCE1O60756 84 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 LYNX1P0DP58 116 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 S100A7L2Q5SY68 101 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 FP248Q71RG6 208 aaPredicted RBP3.13□□□□□ -1.91
RTN4-215ENST00000491592 C5orf56Q8N8D9 126 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 CIRBP-AS1Q8TBR5 109 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 NACAE9PAV3 2078 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 POLEQ07864 2286 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 PKDREJQ9NTG1 2253 aa3.13□□□□□ -1.91
RTN4-215ENST00000491592 IGHV3-64A0A075B6Q5 118 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 TRAV13-2A0A0B4J235 113 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 G3V318 75 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 H0YGX0 51 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 XCL1P47992 114 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 FAM74A4Q5TZK3 123 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 ATP5EP2Q5VTU8 51 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 MIR7-3HGQ8N6C7 128 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 RETNLBQ9BQ08 111 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 RHPN1-AS1Q9BWJ2 59 aa3.12□□□□□ -1.91
RTN4-215ENST00000491592 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.11□□□□□ -1.91
RTN4-215ENST00000491592 TRAV12-3A0A0B4J271 114 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 hADV29S1A0JD25 119 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 A6NN06 94 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 DNAL4O96015 105 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 RPL28P46779 137 aaKnown RBP3.11□□□□□ -1.91
RTN4-215ENST00000491592 ADM2Q7Z4H4 148 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 UBE2D4Q9Y2X8 147 aa3.11□□□□□ -1.91
RTN4-215ENST00000491592 TPRP12270 2363 aaKnown RBP3.11□□□□□ -1.91
RTN4-215ENST00000491592 MKI67P46013 3256 aaKnown RBP3.1□□□□□ -1.91
RTN4-215ENST00000491592 TRBV10-3A0A0K0K1G6 114 aa3.1□□□□□ -1.91
RTN4-215ENST00000491592 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
RTN4-215ENST00000491592 OBSCN-AS1Q96MR7 158 aa3.1□□□□□ -1.91
RTN4-215ENST00000491592 UNC80Q8N2C7 3258 aa3.1□□□□□ -1.91
RTN4-215ENST00000491592 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 MUC7Q8TAX7 377 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.91
RTN4-215ENST00000491592 PRO3102Q9H379 93 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 CDKN2A-AS1Q9UH64 79 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 C22orf24Q9Y442 160 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.91
RTN4-215ENST00000491592 PCNX1Q96RV3 2341 aa3.09□□□□□ -1.92
RTN4-215ENST00000491592 CNOT1A5YKK6 2376 aaKnown RBP3.08□□□□□ -1.92
RTN4-215ENST00000491592 A8MTW9 85 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 H3BPC8 53 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 IGHV3-53P01767 116 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 CRPP02741 224 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 CCKP06307 115 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 ESRGQ1W209 222 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 Q8NDZ9 215 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 DEFB124Q8NES8 71 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 CEP250Q9BV73 2442 aa3.08□□□□□ -1.92
RTN4-215ENST00000491592 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 TRAV7A0A075B6U4 112 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 JMJD7-PLA2G4BH0Y9G9 81 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 DEFB1P60022 68 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 LYPD5Q6UWN5 251 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 LINC00612Q8N6U2 182 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 DYNLRB2Q8TF09 96 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 DEFB104AQ8WTQ1 72 aa3.07□□□□□ -1.92
RTN4-215ENST00000491592 IGKV3-7A0A075B6H7 116 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.06□□□□□ -1.92
RTN4-215ENST00000491592 IGKV3D-7A0A0C4DH55 119 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 TRBV10-1A0A0K0K1A3 114 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 IGKV2-29A2NJV5 120 aaPredicted RBP3.06□□□□□ -1.92
RTN4-215ENST00000491592 IBA57-AS1B1ANH7 110 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 H3BQ85 93 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 NDUFC1O43677 76 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 COX6A2Q02221 97 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 SPINK13Q1W4C9 94 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 Q6ZR54 194 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 MED13LQ71F56 2210 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 C14orf132Q9NPU4 83 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 LINC00846Q9NV44 126 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 ORMDL1Q9P0S3 153 aa3.06□□□□□ -1.92
RTN4-215ENST00000491592 CACNA1BQ00975 2339 aa3.05□□□□□ -1.92
RTN4-215ENST00000491592 Q1T7F1 81 aa3.05□□□□□ -1.92
RTN4-215ENST00000491592 Q8N814 137 aa3.05□□□□□ -1.92
RTN4-215ENST00000491592 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
RTN4-215ENST00000491592 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
RTN4-215ENST00000491592 A8MUU9 505 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 IGLV1-51P01701 117 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 IGLV7-43P04211 117 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms