RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 NDUFA1O15239 70 aa11.95□□□□□ -0.5
APTX-229ENST00000489583 HSBP1O75506 76 aa11.95□□□□□ -0.5
APTX-229ENST00000489583 VCX2Q9H322 139 aa11.95□□□□□ -0.5
APTX-229ENST00000489583 A0A087WZ39 114 aa11.94□□□□□ -0.5
APTX-229ENST00000489583 PHF5AQ7RTV0 110 aaKnown RBP11.94□□□□□ -0.5
APTX-229ENST00000489583 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
APTX-229ENST00000489583 MRPL35Q9NZE8 188 aaKnown RBP11.92□□□□□ -0.5
APTX-229ENST00000489583 ATP5LO75964 103 aa11.91□□□□□ -0.5
APTX-229ENST00000489583 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
APTX-229ENST00000489583 FAM104AQ969W3 186 aa11.91□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BKO60814 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 SERF1AO75920 110 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 IGLV7-43P04211 117 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BJP06899 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BOP23527 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BBP33778 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BDP58876 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BCP62807 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST2H2BEQ16778 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BHQ93079 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 AMELXQ99217 191 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BNQ99877 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 HIST1H2BMQ99879 126 aa11.9□□□□□ -0.5
APTX-229ENST00000489583 A0A096LNJ9 63 aa11.89□□□□□ -0.51
APTX-229ENST00000489583 UBE2BP63146 152 aa11.88□□□□□ -0.51
APTX-229ENST00000489583 PDZD11Q5EBL8 140 aa11.88□□□□□ -0.51
APTX-229ENST00000489583 UBE2D1P51668 147 aa11.87□□□□□ -0.51
APTX-229ENST00000489583 SEC11AP67812 179 aa11.87□□□□□ -0.51
APTX-229ENST00000489583 GAGE2EQ4V326 116 aa11.87□□□□□ -0.51
APTX-229ENST00000489583 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
APTX-229ENST00000489583 GAGE2DQ9UEU5 116 aa11.87□□□□□ -0.51
APTX-229ENST00000489583 PMVKQ15126 192 aa11.86□□□□□ -0.51
APTX-229ENST00000489583 FAM19A2Q8N3H0 131 aa11.86□□□□□ -0.51
APTX-229ENST00000489583 PRR26Q8N8Z3 221 aa11.86□□□□□ -0.51
APTX-229ENST00000489583 H0Y9J4 135 aa11.85□□□□□ -0.51
APTX-229ENST00000489583 NDUFA6P56556 154 aa11.85□□□□□ -0.51
APTX-229ENST00000489583 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
APTX-229ENST00000489583 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
APTX-229ENST00000489583 IGLV1-50A0A075B6I6 118 aa11.84□□□□□ -0.51
APTX-229ENST00000489583 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
APTX-229ENST00000489583 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
APTX-229ENST00000489583 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
APTX-229ENST00000489583 LEPROTL1O95214 131 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 TLX1NBP0CAT3 122 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 LINC00310P59036 64 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
APTX-229ENST00000489583 HSPB8Q9UJY1 196 aa11.83□□□□□ -0.52
APTX-229ENST00000489583 M0QXV9 152 aa11.82□□□□□ -0.52
APTX-229ENST00000489583 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
APTX-229ENST00000489583 HERVK_113P63121 156 aa11.82□□□□□ -0.52
APTX-229ENST00000489583 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
APTX-229ENST00000489583 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
APTX-229ENST00000489583 FAM168BA1KXE4 195 aa11.81□□□□□ -0.52
APTX-229ENST00000489583 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
APTX-229ENST00000489583 NUPR1O60356 82 aa11.8□□□□□ -0.52
APTX-229ENST00000489583 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
APTX-229ENST00000489583 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
APTX-229ENST00000489583 C6orf48Q9UBA6 75 aa11.8□□□□□ -0.52
APTX-229ENST00000489583 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
APTX-229ENST00000489583 PRSS2P07478 247 aa11.78□□□□□ -0.52
APTX-229ENST00000489583 PRR4Q16378 134 aa11.78□□□□□ -0.52
APTX-229ENST00000489583 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
APTX-229ENST00000489583 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
APTX-229ENST00000489583 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.53
APTX-229ENST00000489583 FABP4P15090 132 aa11.77□□□□□ -0.53
APTX-229ENST00000489583 LINC00469Q8N7U9 141 aa11.76□□□□□ -0.53
APTX-229ENST00000489583 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
APTX-229ENST00000489583 H3BRM9 83 aa11.75□□□□□ -0.53
APTX-229ENST00000489583 S100A6P06703 90 aa11.75□□□□□ -0.53
APTX-229ENST00000489583 CKS1BP61024 79 aa11.75□□□□□ -0.53
APTX-229ENST00000489583 MAP1LC3CQ9BXW4 147 aa11.75□□□□□ -0.53
APTX-229ENST00000489583 IGLC3P0DOY3 106 aa11.74□□□□□ -0.53
APTX-229ENST00000489583 H0Y8G0 127 aa11.73□□□□□ -0.53
APTX-229ENST00000489583 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
APTX-229ENST00000489583 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
APTX-229ENST00000489583 A0A0U1RQV1 116 aa11.72□□□□□ -0.53
APTX-229ENST00000489583 C6orf226Q5I0X4 101 aa11.72□□□□□ -0.53
APTX-229ENST00000489583 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
APTX-229ENST00000489583 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
APTX-229ENST00000489583 F8VRH5 84 aa11.71□□□□□ -0.53
APTX-229ENST00000489583 KIAA0087Q14695 138 aa11.71□□□□□ -0.53
APTX-229ENST00000489583 LBHQ53QV2 105 aaPredicted RBP11.71□□□□□ -0.53
APTX-229ENST00000489583 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
APTX-229ENST00000489583 S100A2P29034 98 aa11.69□□□□□ -0.54
APTX-229ENST00000489583 TMEM170BQ5T4T1 132 aa11.69□□□□□ -0.54
APTX-229ENST00000489583 ZNF861PO60384 105 aa11.68□□□□□ -0.54
APTX-229ENST00000489583 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
APTX-229ENST00000489583 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
APTX-229ENST00000489583 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
APTX-229ENST00000489583 C9orf129Q5T035 196 aaKnown RBP11.67□□□□□ -0.54
APTX-229ENST00000489583 SMIM1B2RUZ4 78 aa11.66□□□□□ -0.54
APTX-229ENST00000489583 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
APTX-229ENST00000489583 PLNP26678 52 aa11.66□□□□□ -0.54
APTX-229ENST00000489583 Q8IZM0 81 aa11.66□□□□□ -0.54
APTX-229ENST00000489583 LPAP08519 4548 aa11.66□□□□□ -0.54
APTX-229ENST00000489583 SYS1-DBNDD2H3BUS1 97 aa11.65□□□□□ -0.54
APTX-229ENST00000489583 DPM2O94777 84 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms