RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.32□□□□□ -1.56
SF1-218ENST00000489544 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 XGP55808 180 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 TMEM170BQ5T4T1 132 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 SDIM1Q6ZPB5 146 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 LINC01561Q8N1V8 128 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
SF1-218ENST00000489544 FAT1Q14517 4588 aa5.32□□□□□ -1.56
SF1-218ENST00000489544 F8VRH5 84 aa5.31□□□□□ -1.56
SF1-218ENST00000489544 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
SF1-218ENST00000489544 MAP1LC3CQ9BXW4 147 aa5.31□□□□□ -1.56
SF1-218ENST00000489544 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 H3BRM9 83 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 SYS1-DBNDD2H3BUS1 97 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 PRSS2P07478 247 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 C3orf79P0CE67 100 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
SF1-218ENST00000489544 C6orf226Q5I0X4 101 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 Q6ZSA8 131 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 C6orf48Q9UBA6 75 aa5.3□□□□□ -1.56
SF1-218ENST00000489544 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 A0A096LNI7 61 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 TMEM223A0PJW6 202 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 NDUFA1O15239 70 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 KRTDAPP60985 99 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 SNRPEP62304 92 aaKnown RBP5.29□□□□□ -1.56
SF1-218ENST00000489544 SCXQ7RTU7 201 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 Q8IZM0 81 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
SF1-218ENST00000489544 CDK2AP2O75956 126 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 DPM2O94777 84 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
SF1-218ENST00000489544 S100A6P06703 90 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 CKS1BP61024 79 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 HIST1H2BLQ99880 126 aa5.28□□□□□ -1.56
SF1-218ENST00000489544 IGKCP01834 107 aa5.27□□□□□ -1.57
SF1-218ENST00000489544 S100A2P29034 98 aa5.27□□□□□ -1.57
SF1-218ENST00000489544 RPL18AQ02543 176 aaKnown RBP5.27□□□□□ -1.57
SF1-218ENST00000489544 MAJINQ3KP22 176 aa5.27□□□□□ -1.57
SF1-218ENST00000489544 CIRBP-AS1Q8TBR5 109 aa5.27□□□□□ -1.57
SF1-218ENST00000489544 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 F8WDY8 70 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 RNF151Q2KHN1 245 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 LINC01545Q5VT33 79 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 PET117Q6UWS5 81 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 Q6ZRP5 223 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 SPACA4Q8TDM5 124 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 DPH3Q96FX2 82 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 ZNF625Q96I27 306 aaPredicted RBP5.26□□□□□ -1.57
SF1-218ENST00000489544 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
SF1-218ENST00000489544 A0A087WYN8 130 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 TRBV30A0A0K0K1B3 111 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 PLNP26678 52 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 CIRBPQ14011 172 aaKnown RBP5.25□□□□□ -1.57
SF1-218ENST00000489544 ATOH7Q8N100 152 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 STPG4Q8N801 248 aa5.25□□□□□ -1.57
SF1-218ENST00000489544 FAM168BA1KXE4 195 aa5.24□□□□□ -1.57
SF1-218ENST00000489544 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
SF1-218ENST00000489544 CXCL5P42830 114 aa5.24□□□□□ -1.57
SF1-218ENST00000489544 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
SF1-218ENST00000489544 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
SF1-218ENST00000489544 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
SF1-218ENST00000489544 LEPROTO15243 131 aa5.23□□□□□ -1.57
SF1-218ENST00000489544 PFN2P35080 140 aa5.23□□□□□ -1.57
SF1-218ENST00000489544 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
SF1-218ENST00000489544 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
SF1-218ENST00000489544 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 J3QQQ9 107 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 HERVK_113P61574 105 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 TTTY13Q9BZ97 58 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 NDUFA12Q9UI09 145 aa5.22□□□□□ -1.57
SF1-218ENST00000489544 C20orf202A1L168 122 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 E9PLD3 99 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 FAM19A5Q7Z5A7 132 aaPredicted RBP5.21□□□□□ -1.58
SF1-218ENST00000489544 Q8N1X5 172 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 ERG28Q9UKR5 140 aa5.21□□□□□ -1.58
SF1-218ENST00000489544 SMIM13P0DJ93 91 aa5.2□□□□□ -1.58
SF1-218ENST00000489544 LGALS3P17931 250 aaKnown RBP5.2□□□□□ -1.58
SF1-218ENST00000489544 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
SF1-218ENST00000489544 Q5VSD8 79 aa5.2□□□□□ -1.58
SF1-218ENST00000489544 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
SF1-218ENST00000489544 PKIGQ9Y2B9 76 aa5.2□□□□□ -1.58
SF1-218ENST00000489544 MYMXA0A1B0GTQ4 84 aa5.19□□□□□ -1.58
SF1-218ENST00000489544 LINC00158P58513 81 aa5.19□□□□□ -1.58
SF1-218ENST00000489544 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
SF1-218ENST00000489544 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms