RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 IGKV2D-28P01615 120 aa13.57□□□□□ -0.24
SYNGR1-207ENST00000489206 CKS1BP61024 79 aa13.57□□□□□ -0.24
SYNGR1-207ENST00000489206 MRPL23Q16540 153 aaKnown RBP13.57□□□□□ -0.24
SYNGR1-207ENST00000489206 Q8IZM0 81 aa13.57□□□□□ -0.24
SYNGR1-207ENST00000489206 CCL18P55774 89 aa13.56□□□□□ -0.24
SYNGR1-207ENST00000489206 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
SYNGR1-207ENST00000489206 LINC00337Q8N6G1 96 aa13.56□□□□□ -0.24
SYNGR1-207ENST00000489206 SNCGO76070 127 aa13.56□□□□□ -0.24
SYNGR1-207ENST00000489206 DEFB135Q30KP9 77 aa13.56□□□□□ -0.24
SYNGR1-207ENST00000489206 SPATA3Q8NHX4 192 aa13.55□□□□□ -0.24
SYNGR1-207ENST00000489206 XCL1P47992 114 aa13.54□□□□□ -0.24
SYNGR1-207ENST00000489206 IGHV4-28A0A0C4DH34 117 aa13.53□□□□□ -0.24
SYNGR1-207ENST00000489206 DAD1P61803 113 aa13.53□□□□□ -0.24
SYNGR1-207ENST00000489206 MIFP14174 115 aa13.52□□□□□ -0.24
SYNGR1-207ENST00000489206 PFN2P35080 140 aa13.52□□□□□ -0.25
SYNGR1-207ENST00000489206 Q6Q795 121 aa13.52□□□□□ -0.25
SYNGR1-207ENST00000489206 FAM218AQ96MZ4 157 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 A0A096LPF7 62 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 H0YGX0 51 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 ATP5G1P05496 136 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 ACYP1P07311 99 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 CD164L2Q6UWJ8 174 aa13.51□□□□□ -0.25
SYNGR1-207ENST00000489206 BAALC-AS2P0C853 105 aa13.5□□□□□ -0.25
SYNGR1-207ENST00000489206 CXCL5P42830 114 aa13.5□□□□□ -0.25
SYNGR1-207ENST00000489206 SMIM11BQ8TCY0 68 aa13.5□□□□□ -0.25
SYNGR1-207ENST00000489206 C15orf53Q8NAA6 179 aa13.49□□□□□ -0.25
SYNGR1-207ENST00000489206 Q8NAQ8 132 aa13.49□□□□□ -0.25
SYNGR1-207ENST00000489206 GAGE2BQ13066 116 aa13.49□□□□□ -0.25
SYNGR1-207ENST00000489206 GAGE2EQ4V326 116 aa13.49□□□□□ -0.25
SYNGR1-207ENST00000489206 GAGE2DQ9UEU5 116 aa13.49□□□□□ -0.25
SYNGR1-207ENST00000489206 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
SYNGR1-207ENST00000489206 LINC00269Q8N2A0 174 aa13.48□□□□□ -0.25
SYNGR1-207ENST00000489206 DEFB4AO15263 64 aa13.47□□□□□ -0.25
SYNGR1-207ENST00000489206 WIPF1O43516 503 aa13.47□□□□□ -0.25
SYNGR1-207ENST00000489206 C11orf68Q9H3H3 251 aaKnown RBP13.47□□□□□ -0.25
SYNGR1-207ENST00000489206 COX17Q14061 63 aa13.46□□□□□ -0.25
SYNGR1-207ENST00000489206 WFDC9Q8NEX5 89 aa13.46□□□□□ -0.25
SYNGR1-207ENST00000489206 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.25
SYNGR1-207ENST00000489206 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
SYNGR1-207ENST00000489206 REG3AQ06141 175 aa13.45□□□□□ -0.26
SYNGR1-207ENST00000489206 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
SYNGR1-207ENST00000489206 CFAP161Q6P656 301 aa13.45□□□□□ -0.26
SYNGR1-207ENST00000489206 DNAL4O96015 105 aa13.44□□□□□ -0.26
SYNGR1-207ENST00000489206 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
SYNGR1-207ENST00000489206 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
SYNGR1-207ENST00000489206 CELA1Q9UNI1 258 aa13.44□□□□□ -0.26
SYNGR1-207ENST00000489206 MALP21145 153 aa13.43□□□□□ -0.26
SYNGR1-207ENST00000489206 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
SYNGR1-207ENST00000489206 LELP1Q5T871 98 aa13.42□□□□□ -0.26
SYNGR1-207ENST00000489206 NDUFC2O95298 119 aa13.41□□□□□ -0.26
SYNGR1-207ENST00000489206 OR13C6PQ8NH95 151 aa13.41□□□□□ -0.26
SYNGR1-207ENST00000489206 ANAPC13Q9BS18 74 aa13.4□□□□□ -0.26
SYNGR1-207ENST00000489206 Q9HAA7 133 aa13.4□□□□□ -0.26
SYNGR1-207ENST00000489206 A0A087WYN8 130 aa13.4□□□□□ -0.27
SYNGR1-207ENST00000489206 IGHV4-30-4P0DP06 118 aa13.4□□□□□ -0.27
SYNGR1-207ENST00000489206 TTC32Q5I0X7 151 aa13.4□□□□□ -0.27
SYNGR1-207ENST00000489206 VWFP04275 2813 aa13.39□□□□□ -0.27
SYNGR1-207ENST00000489206 MUC7Q8TAX7 377 aa13.38□□□□□ -0.27
SYNGR1-207ENST00000489206 FBN1P35555 2871 aaKnown RBP13.38□□□□□ -0.27
SYNGR1-207ENST00000489206 TRBV7-7A0A0K0K1E9 115 aa13.37□□□□□ -0.27
SYNGR1-207ENST00000489206 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
SYNGR1-207ENST00000489206 ATRQ13535 2644 aa13.37□□□□□ -0.27
SYNGR1-207ENST00000489206 IGLV10-54A0A075B6I4 117 aa13.36□□□□□ -0.27
SYNGR1-207ENST00000489206 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
SYNGR1-207ENST00000489206 Q8N3U1 123 aa13.36□□□□□ -0.27
SYNGR1-207ENST00000489206 A0A1B0GX51 115 aa13.35□□□□□ -0.27
SYNGR1-207ENST00000489206 NBEAL2Q6ZNJ1 2754 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 LECT2O14960 151 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 HTN3P15516 51 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 SDIM1Q6ZPB5 146 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 PRR34Q9NV39 138 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 IMUPQ9GZP8 106 aa13.34□□□□□ -0.27
SYNGR1-207ENST00000489206 LINC00643Q86TS7 51 aa13.33□□□□□ -0.28
SYNGR1-207ENST00000489206 TMEM126AQ9H061 195 aa13.33□□□□□ -0.28
SYNGR1-207ENST00000489206 OBSCN-AS1Q96MR7 158 aa13.32□□□□□ -0.28
SYNGR1-207ENST00000489206 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
SYNGR1-207ENST00000489206 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
SYNGR1-207ENST00000489206 NANOS2P60321 138 aaKnown RBP13.31□□□□□ -0.28
SYNGR1-207ENST00000489206 NHLRC4P0CG21 123 aaPredicted RBP13.3□□□□□ -0.28
SYNGR1-207ENST00000489206 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
SYNGR1-207ENST00000489206 TENM1Q9UKZ4 2725 aa13.3□□□□□ -0.28
SYNGR1-207ENST00000489206 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
SYNGR1-207ENST00000489206 H3BNG1 76 aa13.29□□□□□ -0.28
SYNGR1-207ENST00000489206 GAGE2AQ6NT46 116 aa13.28□□□□□ -0.28
SYNGR1-207ENST00000489206 KLK12Q9UKR0 248 aa13.28□□□□□ -0.28
SYNGR1-207ENST00000489206 LYPD5Q6UWN5 251 aa13.27□□□□□ -0.28
SYNGR1-207ENST00000489206 SMCR5Q8TEV8 140 aa13.27□□□□□ -0.28
SYNGR1-207ENST00000489206 C9orf116Q5BN46 136 aaPredicted RBP13.27□□□□□ -0.29
SYNGR1-207ENST00000489206 COL6A5A8TX70 2615 aa13.26□□□□□ -0.29
SYNGR1-207ENST00000489206 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
SYNGR1-207ENST00000489206 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
SYNGR1-207ENST00000489206 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
SYNGR1-207ENST00000489206 UNQ6190/PRO20217Q6UXQ8 127 aa13.25□□□□□ -0.29
SYNGR1-207ENST00000489206 Q8N814 137 aa13.23□□□□□ -0.29
SYNGR1-207ENST00000489206 C10orf25Q5T742 122 aa13.23□□□□□ -0.29
SYNGR1-207ENST00000489206 MDFIQ99750 246 aa13.23□□□□□ -0.29
SYNGR1-207ENST00000489206 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
SYNGR1-207ENST00000489206 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
SYNGR1-207ENST00000489206 SLPIP03973 132 aa13.21□□□□□ -0.29
SYNGR1-207ENST00000489206 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms