RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 RPL37AP8A6NKH3 93 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
PTCH1-211ENST00000488809 FAM74A3Q4VXF1 159 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 C4orf48Q5BLP8 95 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 LINC00167Q96N53 147 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 EIF5A2Q9GZV4 153 aaKnown RBP3.75□□□□□ -1.81
PTCH1-211ENST00000488809 VCX2Q9H322 139 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
PTCH1-211ENST00000488809 NPYP01303 97 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 NPSP0C0P6 89 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 HERVK_113P63121 156 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 SRSF3P84103 164 aaKnown RBP3.74□□□□□ -1.81
PTCH1-211ENST00000488809 PNRC1Q12796 327 aaPredicted RBP3.74□□□□□ -1.81
PTCH1-211ENST00000488809 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 CYSLTR1Q9Y271 337 aa3.74□□□□□ -1.81
PTCH1-211ENST00000488809 A0A1B0GVG6 124 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 GAGE10A6NGK3 116 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 FAM19A3Q7Z5A8 133 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 GEMIN7Q9H840 131 aaKnown RBP3.73□□□□□ -1.81
PTCH1-211ENST00000488809 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
PTCH1-211ENST00000488809 IGLV5-37A0A075B6J1 123 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 IGKV2-28A0A075B6P5 120 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 IGKV2D-28P01615 120 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 G0S2P27469 103 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 ADIRFQ15847 76 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 ORMDL2Q53FV1 153 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 MRPL54Q6P161 138 aaKnown RBP3.72□□□□□ -1.81
PTCH1-211ENST00000488809 C2orf66Q6UXQ4 117 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 TMEM136Q6ZRR5 245 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 PRELID3AQ96N28 172 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 AMELXQ99217 191 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 MAP1LC3AQ9H492 121 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 LAMTOR2Q9Y2Q5 125 aa3.72□□□□□ -1.81
PTCH1-211ENST00000488809 K7EMI3 77 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 SRP19P09132 144 aaKnown RBP3.71□□□□□ -1.82
PTCH1-211ENST00000488809 RPL23P62829 140 aaKnown RBP3.71□□□□□ -1.82
PTCH1-211ENST00000488809 PRLHP81277 87 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 ALKAL2Q6UX46 152 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 TCTE3Q8IZS6 198 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 NAT8Q9UHE5 227 aa3.71□□□□□ -1.82
PTCH1-211ENST00000488809 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
PTCH1-211ENST00000488809 LOC389332A0A1B0GUA5 103 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 CFC1BP0CG36 223 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 KRTAP13-3Q3SY46 172 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 PDZD11Q5EBL8 140 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 CBLN2Q8IUK8 224 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 FAM19A2Q8N3H0 131 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 Q8N8P6 123 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 DAND5Q8N907 189 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 COX7B2Q8TF08 81 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 TMEM126AQ9H061 195 aa3.7□□□□□ -1.82
PTCH1-211ENST00000488809 A0A1B0GXF2 115 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 ATP5LO75964 103 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 SPINK1P00995 79 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 RAB5BP61020 215 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 RPL24P83731 157 aaKnown RBP3.69□□□□□ -1.82
PTCH1-211ENST00000488809 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 C3orf22Q8N5N4 141 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 PLEKHB2Q96CS7 222 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 TIMM17AQ99595 171 aa3.69□□□□□ -1.82
PTCH1-211ENST00000488809 IGIPA6NJ69 53 aa3.68□□□□□ -1.82
PTCH1-211ENST00000488809 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
PTCH1-211ENST00000488809 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
PTCH1-211ENST00000488809 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
PTCH1-211ENST00000488809 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
PTCH1-211ENST00000488809 Q8NBF4 154 aa3.67□□□□□ -1.82
PTCH1-211ENST00000488809 NXT2Q9NPJ8 142 aaKnown RBP3.67□□□□□ -1.82
PTCH1-211ENST00000488809 TMEM238C9JI98 176 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 H3BRM9 83 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 M0R378 163 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 PFN2P35080 140 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
PTCH1-211ENST00000488809 PEA15Q15121 130 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 SPRR4Q96PI1 79 aa3.66□□□□□ -1.82
PTCH1-211ENST00000488809 MRPL18Q9H0U6 180 aaKnown RBP3.66□□□□□ -1.82
PTCH1-211ENST00000488809 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 SCO1O75880 301 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 VPREB1P12018 145 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 COX17Q14061 63 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 SFTA2Q6UW10 78 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 ERASQ7Z444 233 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 TOMM6Q96B49 74 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 KRTAP4-1Q9BYQ7 146 aa3.65□□□□□ -1.83
PTCH1-211ENST00000488809 SLC25A20O43772 301 aa3.64□□□□□ -1.83
PTCH1-211ENST00000488809 RAB14P61106 215 aa3.64□□□□□ -1.83
PTCH1-211ENST00000488809 XP32Q5T750 250 aa3.64□□□□□ -1.83
PTCH1-211ENST00000488809 AKAP14Q86UN6 197 aa3.64□□□□□ -1.83
PTCH1-211ENST00000488809 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
PTCH1-211ENST00000488809 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms