RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 M0R143 59 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 ATOX1O00244 68 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 NDUFC1O43677 76 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 MPC2O95563 127 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 SPINK1P00995 79 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 S100A8P05109 93 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 NCMAPQ5T1S8 102 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 C10orf113Q5VZT2 155 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 Q8IZM0 81 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 FDCSPQ8NFU4 85 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 LINC01600Q96MT4 127 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 PRO1933Q9H354 126 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 RGPD4Q7Z3J3 1758 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 CCNB3Q8WWL7 1395 aa0.19□□□□□ -2.38
CD46-215ENST00000488596 DSTQ03001 7570 aaKnown RBP0.18□□□□□ -2.38
CD46-215ENST00000488596 C5P01031 1676 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
CD46-215ENST00000488596 POLA1P09884 1462 aaPredicted RBP0.18□□□□□ -2.38
CD46-215ENST00000488596 PKD1L1Q8TDX9 2849 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 TARBP1Q13395 1621 aaKnown RBP0.18□□□□□ -2.38
CD46-215ENST00000488596 LPAP08519 4548 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 A0A087WVE0 104 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 C10orf142B7Z368 130 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 LINC00032P0C843 101 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 PIGYQ3MUY2 71 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 PSMG4Q5JS54 123 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 VAMP8Q9BV40 100 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 DPY30Q9C005 99 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 CACFD1Q9UGQ2 172 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 RGPD3A6NKT7 1758 aaPredicted RBP0.18□□□□□ -2.38
CD46-215ENST00000488596 ABCC2Q92887 1545 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 TULP4Q9NRJ4 1543 aa0.18□□□□□ -2.38
CD46-215ENST00000488596 PLEKHH2Q8IVE3 1493 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 RAPGEF2Q9Y4G8 1499 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 KIAA0556O60303 1618 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 MYO3AQ8NEV4 1616 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 H7BZZ5 65 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 CFDP00746 253 aaPredicted RBP0.17□□□□□ -2.38
CD46-215ENST00000488596 UQCRHP07919 91 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 ASIPP42127 132 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 TROQ12816 1431 aaPredicted RBP0.17□□□□□ -2.38
CD46-215ENST00000488596 WFDC2Q14508 124 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 PMCHL1Q16048 86 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 COL5A1-AS1Q5SY13 56 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 TTC37Q6PGP7 1564 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 CSPG4Q6UVK1 2322 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 LCN9Q8WX39 176 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 BAZ1AQ9NRL2 1556 aaPredicted RBP0.17□□□□□ -2.38
CD46-215ENST00000488596 CRYBG1Q9Y4K1 1723 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 KIF20BQ96Q89 1820 aa0.17□□□□□ -2.38
CD46-215ENST00000488596 PKD1L3Q7Z443 1732 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 UBR1Q8IWV7 1749 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 KIAA1551Q9HCM1 1747 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 TRBV25-1A0A075B6N4 114 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 TRBV7-4A0A0J9YYF1 115 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 C7orf77A4D0Y5 90 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 SYS1-DBNDD2H3BUS1 97 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 PKIAP61925 76 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 SERP2Q8N6R1 65 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 TRGV9Q99603 122 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 SNHG12Q9BXW3 62 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 LINC00846Q9NV44 126 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
CD46-215ENST00000488596 FLNCQ14315 2725 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 EPRSP07814 1512 aaKnown RBP0.16□□□□□ -2.38
CD46-215ENST00000488596 COL14A1Q05707 1796 aaKnown RBP0.16□□□□□ -2.38
CD46-215ENST00000488596 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 FANCAO15360 1455 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 NRXN1Q9ULB1 1477 aa0.16□□□□□ -2.38
CD46-215ENST00000488596 TNXBP22105 4242 aa0.15□□□□□ -2.38
CD46-215ENST00000488596 SETBP1Q9Y6X0 1596 aa0.15□□□□□ -2.38
CD46-215ENST00000488596 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 TENM4Q6N022 2769 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 CACNA1AO00555 2505 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 CUX1P39880 1505 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 UQCRHLA0A096LP55 91 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 TRBV7-7A0A0K0K1E9 115 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 LINC00959A0A1B0GUT2 108 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 H3BQF6 201 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 FAUP35544 74 aaKnown RBP0.15□□□□□ -2.39
CD46-215ENST00000488596 Q5VSD8 79 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 U3KQA8 63 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 LRRC37AA6NMS7 1700 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 FMN2Q9NZ56 1722 aa0.15□□□□□ -2.39
CD46-215ENST00000488596 CHD8Q9HCK8 2581 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 HMCN2Q8NDA2 5059 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 EDC4Q6P2E9 1401 aaKnown RBP0.14□□□□□ -2.39
CD46-215ENST00000488596 ALKQ9UM73 1620 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
CD46-215ENST00000488596 A0A1B0GU69 56 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 H0Y9P7 68 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 COX6B1P14854 86 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 ETDBQ3ZM63 59 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 C6orf201Q7Z4U5 140 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 DEFB107AQ8IZN7 70 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 DEFB123Q8N688 67 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 ATP10BO94823 1461 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 SMARCA2P51531 1590 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms