RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 INAFM2P0DMQ5 153 aa10.1□□□□□ -0.79
ERGIC3-216ENST00000488384 STPG4Q8N801 248 aa10.1□□□□□ -0.79
ERGIC3-216ENST00000488384 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
ERGIC3-216ENST00000488384 IGLC3P0DOY3 106 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 NDUFA6P56556 154 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 LINC00310P59036 64 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 Q8IZM0 81 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
ERGIC3-216ENST00000488384 DMBT1Q9UGM3 2413 aaPredicted RBP10.08□□□□□ -0.8
ERGIC3-216ENST00000488384 PRSS2P07478 247 aa10.08□□□□□ -0.8
ERGIC3-216ENST00000488384 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
ERGIC3-216ENST00000488384 HSBP1O75506 76 aa10.07□□□□□ -0.8
ERGIC3-216ENST00000488384 TLX1NBP0CAT3 122 aa10.07□□□□□ -0.8
ERGIC3-216ENST00000488384 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
ERGIC3-216ENST00000488384 SERF1AO75920 110 aa10.06□□□□□ -0.8
ERGIC3-216ENST00000488384 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
ERGIC3-216ENST00000488384 FAM19A2Q8N3H0 131 aa10.06□□□□□ -0.8
ERGIC3-216ENST00000488384 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
ERGIC3-216ENST00000488384 C6orf226Q5I0X4 101 aa10.05□□□□□ -0.8
ERGIC3-216ENST00000488384 Q6ZRP5 223 aa10.05□□□□□ -0.8
ERGIC3-216ENST00000488384 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
ERGIC3-216ENST00000488384 CKS1BP61024 79 aa10.04□□□□□ -0.8
ERGIC3-216ENST00000488384 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
ERGIC3-216ENST00000488384 IFI27L1Q96BM0 104 aa10.04□□□□□ -0.8
ERGIC3-216ENST00000488384 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
ERGIC3-216ENST00000488384 H3BRM9 83 aa10.03□□□□□ -0.8
ERGIC3-216ENST00000488384 CXCL5P42830 114 aa10.03□□□□□ -0.8
ERGIC3-216ENST00000488384 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
ERGIC3-216ENST00000488384 F8VRH5 84 aa10.02□□□□□ -0.81
ERGIC3-216ENST00000488384 NUPR1O60356 82 aa10.02□□□□□ -0.81
ERGIC3-216ENST00000488384 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
ERGIC3-216ENST00000488384 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
ERGIC3-216ENST00000488384 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 NDUFC2-KCTD14E9PQ53 114 aa10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
ERGIC3-216ENST00000488384 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
ERGIC3-216ENST00000488384 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
ERGIC3-216ENST00000488384 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
ERGIC3-216ENST00000488384 C9orf129Q5T035 196 aaKnown RBP9.98□□□□□ -0.81
ERGIC3-216ENST00000488384 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
ERGIC3-216ENST00000488384 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
ERGIC3-216ENST00000488384 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
ERGIC3-216ENST00000488384 LRP1Q07954 4544 aaKnown RBP9.96□□□□□ -0.81
ERGIC3-216ENST00000488384 ODF1Q14990 250 aa9.96□□□□□ -0.82
ERGIC3-216ENST00000488384 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
ERGIC3-216ENST00000488384 H0Y8G0 127 aa9.95□□□□□ -0.82
ERGIC3-216ENST00000488384 PHF5AQ7RTV0 110 aaKnown RBP9.95□□□□□ -0.82
ERGIC3-216ENST00000488384 HSPB8Q9UJY1 196 aa9.95□□□□□ -0.82
ERGIC3-216ENST00000488384 FABP4P15090 132 aa9.94□□□□□ -0.82
ERGIC3-216ENST00000488384 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
ERGIC3-216ENST00000488384 S100A6P06703 90 aa9.93□□□□□ -0.82
ERGIC3-216ENST00000488384 AKR1D1P51857 326 aa9.93□□□□□ -0.82
ERGIC3-216ENST00000488384 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
ERGIC3-216ENST00000488384 M0QXV9 152 aa9.91□□□□□ -0.82
ERGIC3-216ENST00000488384 S100A12P80511 92 aa9.91□□□□□ -0.82
ERGIC3-216ENST00000488384 SERTAD4-AS1Q5TG53 156 aa9.91□□□□□ -0.82
ERGIC3-216ENST00000488384 LINC00518Q8N0U6 118 aa9.91□□□□□ -0.82
ERGIC3-216ENST00000488384 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
ERGIC3-216ENST00000488384 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
ERGIC3-216ENST00000488384 PSORS1C2Q9UIG4 136 aa9.89□□□□□ -0.83
ERGIC3-216ENST00000488384 KRTAP29-1A8MX34 341 aaPredicted RBP9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 PLNP26678 52 aa9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
ERGIC3-216ENST00000488384 PFN2P35080 140 aa9.87□□□□□ -0.83
ERGIC3-216ENST00000488384 MAP1LC3CQ9BXW4 147 aa9.87□□□□□ -0.83
ERGIC3-216ENST00000488384 DPM2O94777 84 aa9.86□□□□□ -0.83
ERGIC3-216ENST00000488384 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
ERGIC3-216ENST00000488384 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 OXTP01178 125 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 IGKCP01834 107 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 COX17Q14061 63 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 C12orf57Q99622 126 aa9.84□□□□□ -0.83
ERGIC3-216ENST00000488384 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
ERGIC3-216ENST00000488384 J3QL48 77 aa9.83□□□□□ -0.84
ERGIC3-216ENST00000488384 SMIM6P0DI80 62 aa9.83□□□□□ -0.84
ERGIC3-216ENST00000488384 UBE2BP63146 152 aa9.83□□□□□ -0.84
ERGIC3-216ENST00000488384 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
ERGIC3-216ENST00000488384 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms