RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 F6UB75 175 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 NCR3O14931 201 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 DEFB1P60022 68 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 TMEM254Q8TBM7 123 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 SETXQ7Z333 2677 aaKnown RBP4.49□□□□□ -1.69
SIK3-212ENST00000488337 PRR9Q5T870 116 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 Q8N6K4 173 aa4.49□□□□□ -1.69
SIK3-212ENST00000488337 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 LINC00158P58513 81 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 HTN3P15516 51 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 ZFP36P26651 326 aaKnown RBP4.48□□□□□ -1.69
SIK3-212ENST00000488337 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 C20orf203Q8NBC4 194 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 AKAP13Q12802 2813 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 J3QL48 77 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 Q5VV11 94 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
SIK3-212ENST00000488337 LCE6AA0A183 80 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 UBE2BP63146 152 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 CXCL6P80162 114 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 LINC00528Q8N1L1 170 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 DIRC1Q969H9 104 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 NDUFA4O00483 81 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 RNASE3P12724 160 aaKnown RBP4.47□□□□□ -1.69
SIK3-212ENST00000488337 LINC01547P58512 204 aaPredicted RBP4.47□□□□□ -1.69
SIK3-212ENST00000488337 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
SIK3-212ENST00000488337 IGHV3-73A0A0B4J1V6 119 aa4.46□□□□□ -1.69
SIK3-212ENST00000488337 H3BUX3 64 aa4.46□□□□□ -1.69
SIK3-212ENST00000488337 SMG1Q96Q15 3661 aaKnown RBP4.46□□□□□ -1.69
SIK3-212ENST00000488337 DMXL1Q9Y485 3027 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 VPREB1P12018 145 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 UBL5Q9BZL1 73 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 PRYO14603 147 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 ZNF292O60281 2723 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 CSMD2Q7Z408 3487 aa4.46□□□□□ -1.7
SIK3-212ENST00000488337 C5orf56Q8N8D9 126 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 FBXL19-AS1Q494R0 122 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 A8MUN3 132 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
SIK3-212ENST00000488337 LRBAP50851 2863 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 HAMPP81172 84 aa4.45□□□□□ -1.7
SIK3-212ENST00000488337 H0YGX0 51 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 C19orf84I3L1E1 186 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 NREPQ16612 68 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 IGHV4-30-2A0A087WSY4 118 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 C1orf64Q8NEQ6 169 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 LCA10Q71F78 164 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 FAM19A3Q7Z5A8 133 aa4.44□□□□□ -1.7
SIK3-212ENST00000488337 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 Q8N3U1 123 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 ORMDL1Q9P0S3 153 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 IGHV3-38A0A0C4DH36 116 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 K7EQG2 157 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 M0QY20 66 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
SIK3-212ENST00000488337 Q6ZQT0 140 aa4.43□□□□□ -1.7
SIK3-212ENST00000488337 IGHV4-61A0A0C4DH41 118 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 PSPHP1O15172 72 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 PSCAO43653 123 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 SPINK13Q1W4C9 94 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 Q6ZTI0 123 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 TEP1Q99973 2627 aaKnown RBP4.42□□□□□ -1.7
SIK3-212ENST00000488337 LY6G6DO95868 133 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
SIK3-212ENST00000488337 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 KLK9Q9UKQ9 250 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 INAFM1C9JVW0 142 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 C11orf71Q6IPW1 123 aa4.42□□□□□ -1.7
SIK3-212ENST00000488337 HELZ2Q9BYK8 2649 aaKnown RBP4.42□□□□□ -1.7
SIK3-212ENST00000488337 IGHV1OR15-1A0A075B7D0 117 aa4.41□□□□□ -1.7
SIK3-212ENST00000488337 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
SIK3-212ENST00000488337 LMO4P61968 165 aa4.41□□□□□ -1.7
SIK3-212ENST00000488337 Q9H8V8 135 aa4.41□□□□□ -1.7
SIK3-212ENST00000488337 KLLNB2CW77 178 aa4.41□□□□□ -1.7
SIK3-212ENST00000488337 TRGV2A0A075B6R0 118 aa4.4□□□□□ -1.7
SIK3-212ENST00000488337 H3BUA1 57 aa4.4□□□□□ -1.7
SIK3-212ENST00000488337 LECT2O14960 151 aa4.4□□□□□ -1.7
SIK3-212ENST00000488337 IGHV3-53P01767 116 aa4.4□□□□□ -1.71
SIK3-212ENST00000488337 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
SIK3-212ENST00000488337 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
SIK3-212ENST00000488337 KLK9Q2XQG4 91 aa4.4□□□□□ -1.71
SIK3-212ENST00000488337 C9orf66Q5T8R8 295 aa4.4□□□□□ -1.71
SIK3-212ENST00000488337 CSMD1Q96PZ7 3565 aa4.4□□□□□ -1.71
SIK3-212ENST00000488337 M0R2N4 97 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms