RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 S100A3P33764 101 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 CCL18P55774 89 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 FXYD6P3P58550 94 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 DEFB114Q30KQ6 69 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 GDF5OSQ5U4N7 250 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 OBSCN-AS1Q96MR7 158 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 WFDC10AQ9H1F0 79 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 C5P01031 1676 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 SCN7AQ01118 1682 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 SHPRHQ149N8 1683 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 COL14A1Q05707 1796 aaKnown RBP2.33□□□□□ -2.04
VPS8-224ENST00000488255 MED13Q9UHV7 2174 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 SHROOM3Q8TF72 1996 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 SHANK1Q9Y566 2161 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 M0R135 149 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 M0R3E3 92 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 MRPL33O75394 65 aaKnown RBP2.32□□□□□ -2.04
VPS8-224ENST00000488255 TFF1P04155 84 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 CTSGP08311 255 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 ENHOQ6UWT2 76 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 PATE1Q8WXA2 126 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 EML5Q05BV3 1969 aa2.32□□□□□ -2.04
VPS8-224ENST00000488255 DDX60LQ5H9U9 1706 aaKnown RBP2.31□□□□□ -2.04
VPS8-224ENST00000488255 SIP14410 1827 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 A0A087WVE0 104 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 TRAV21A0A0B4J279 112 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 TRBV6-4A0A1B0GX49 114 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 HCP5Q6MZN7 132 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 BRD3OSQ6XYD6 125 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 GAFA1Q96PS6 74 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 MALRD1Q5VYJ5 2156 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 ADAMTS7Q9UKP4 1686 aa2.31□□□□□ -2.04
VPS8-224ENST00000488255 IGKV3-7A0A075B6H7 116 aa2.3□□□□□ -2.04
VPS8-224ENST00000488255 LCE6AA0A183 80 aa2.3□□□□□ -2.04
VPS8-224ENST00000488255 LRP6O75581 1613 aa2.3□□□□□ -2.04
VPS8-224ENST00000488255 MUC22E2RYF6 1773 aaPredicted RBP2.3□□□□□ -2.04
VPS8-224ENST00000488255 COL5A1P20908 1838 aaPredicted RBP2.29□□□□□ -2.04
VPS8-224ENST00000488255 LY75O60449 1722 aa2.29□□□□□ -2.04
VPS8-224ENST00000488255 TIAM2Q8IVF5 1701 aa2.29□□□□□ -2.04
VPS8-224ENST00000488255 DDX60Q8IY21 1712 aaKnown RBP2.29□□□□□ -2.04
VPS8-224ENST00000488255 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
VPS8-224ENST00000488255 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
VPS8-224ENST00000488255 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
VPS8-224ENST00000488255 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
VPS8-224ENST00000488255 ZNF236Q9UL36 1845 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 TRGV4A0A0C4DH28 118 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 CLPSL1A2RUU4 121 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 ZNF137PP52743 207 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 DEFB132Q7Z7B7 95 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 C9orf163Q8N9P6 203 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 LINC00304Q8N9R0 145 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 ARHGAP32A7KAX9 2087 aa2.28□□□□□ -2.04
VPS8-224ENST00000488255 NCOA6Q14686 2063 aaPredicted RBP2.28□□□□□ -2.04
VPS8-224ENST00000488255 NRXN2Q9P2S2 1712 aa2.28□□□□□ -2.05
VPS8-224ENST00000488255 DEPDC5O75140 1603 aa2.28□□□□□ -2.05
VPS8-224ENST00000488255 PRRC2BQ5JSZ5 2229 aaKnown RBP2.27□□□□□ -2.05
VPS8-224ENST00000488255 I3L3M4 83 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 J3QRE1 110 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 P0C880 135 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 DEFB112Q30KQ8 113 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 FDCSPQ8NFU4 85 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 LMO7Q8WWI1 1683 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 CR1P17927 2039 aa2.27□□□□□ -2.05
VPS8-224ENST00000488255 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 M0R1W7 72 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 NCR3O14931 201 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 RNASE3P12724 160 aaKnown RBP2.26□□□□□ -2.05
VPS8-224ENST00000488255 COX6B1P14854 86 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 TIMM8BQ9Y5J9 83 aaPredicted RBP2.26□□□□□ -2.05
VPS8-224ENST00000488255 R4GN34 69 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 DUOX1Q9NRD9 1551 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 INTS1Q8N201 2190 aaKnown RBP2.26□□□□□ -2.05
VPS8-224ENST00000488255 MED12Q93074 2177 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 BCORQ6W2J9 1755 aa2.26□□□□□ -2.05
VPS8-224ENST00000488255 E9PCH4 1651 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 LOC110117498A0A087WWA1 95 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 IGIPA6NJ69 53 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 C10orf142B7Z368 130 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 SPINK4O60575 86 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 ARL14EPLP0DKL9 152 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 DEFB134Q4QY38 66 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 TTTY12Q9BZ98 90 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 PARP4Q9UKK3 1724 aaKnown RBP2.25□□□□□ -2.05
VPS8-224ENST00000488255 PCDH15Q96QU1 1955 aa2.25□□□□□ -2.05
VPS8-224ENST00000488255 ETDCA0A1B0GVM5 59 aa2.24□□□□□ -2.05
VPS8-224ENST00000488255 NDUFA4O00483 81 aa2.24□□□□□ -2.05
VPS8-224ENST00000488255 IGLV3-1P01715 115 aa2.24□□□□□ -2.05
VPS8-224ENST00000488255 RPL37AP61513 92 aaKnown RBP2.24□□□□□ -2.05
VPS8-224ENST00000488255 HAMPP81172 84 aa2.24□□□□□ -2.05
VPS8-224ENST00000488255 LINC00322Q6ZN03 302 aaPredicted RBP2.24□□□□□ -2.05
VPS8-224ENST00000488255 DLEC1Q9Y238 1755 aa2.23□□□□□ -2.05
VPS8-224ENST00000488255 TOGARAM1Q9Y4F4 1720 aa2.23□□□□□ -2.05
VPS8-224ENST00000488255 TRGV2A0A075B6R0 118 aa2.23□□□□□ -2.05
VPS8-224ENST00000488255 IGKV3OR2-268A0A0C4DH90 116 aa2.23□□□□□ -2.05
VPS8-224ENST00000488255 NDUFA3O95167 84 aa2.23□□□□□ -2.05
VPS8-224ENST00000488255 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
VPS8-224ENST00000488255 CCL26Q9Y258 94 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms