RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PLGLAQ15195 96 aa1.42□□□□□ -2.18
CUL3-211ENST00000487558 C18orf32Q8TCD1 76 aa1.42□□□□□ -2.18
CUL3-211ENST00000487558 CADP27708 2225 aa1.42□□□□□ -2.18
CUL3-211ENST00000487558 NAV3Q8IVL0 2385 aa1.41□□□□□ -2.18
CUL3-211ENST00000487558 A0A087WVE0 104 aa1.41□□□□□ -2.18
CUL3-211ENST00000487558 A0A096LNT2 108 aa1.41□□□□□ -2.18
CUL3-211ENST00000487558 C10orf142B7Z368 130 aa1.41□□□□□ -2.18
CUL3-211ENST00000487558 PRB3Q04118 309 aaPredicted RBP1.41□□□□□ -2.18
CUL3-211ENST00000487558 LINC00846Q9NV44 126 aa1.41□□□□□ -2.18
CUL3-211ENST00000487558 PLXNB2O15031 1838 aa1.4□□□□□ -2.18
CUL3-211ENST00000487558 AHCTF1Q8WYP5 2266 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 GCHFRP30047 84 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 FXYD6P3P58550 94 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
CUL3-211ENST00000487558 TARBP1Q13395 1621 aaKnown RBP1.4□□□□□ -2.19
CUL3-211ENST00000487558 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 INO80Q9ULG1 1556 aaPredicted RBP1.39□□□□□ -2.19
CUL3-211ENST00000487558 SMIM13P0DJ93 91 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 Q6ZRX8 168 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 FDCSPQ8NFU4 85 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 TMEM263Q8WUH6 116 aaKnown RBP1.39□□□□□ -2.19
CUL3-211ENST00000487558 DUOX2Q9NRD8 1548 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 PAPPA2Q9BXP8 1791 aa1.39□□□□□ -2.19
CUL3-211ENST00000487558 RGPD1P0DJD0 1748 aa1.38□□□□□ -2.19
CUL3-211ENST00000487558 XRN1Q8IZH2 1706 aaKnown RBP1.38□□□□□ -2.19
CUL3-211ENST00000487558 GVQW2A0A096LPI5 108 aaPredicted RBP1.38□□□□□ -2.19
CUL3-211ENST00000487558 UMAD1C9J7I0 102 aa1.38□□□□□ -2.19
CUL3-211ENST00000487558 PIN1P1O15428 100 aa1.38□□□□□ -2.19
CUL3-211ENST00000487558 LY6G6CO95867 125 aa1.38□□□□□ -2.19
CUL3-211ENST00000487558 SPINT3P49223 89 aa1.38□□□□□ -2.19
CUL3-211ENST00000487558 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
CUL3-211ENST00000487558 NKTRP30414 1462 aaKnown RBP1.37□□□□□ -2.19
CUL3-211ENST00000487558 PIK3C2BO00750 1634 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 PLCH1Q4KWH8 1693 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 H0Y9P7 68 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 GNGT1P63211 74 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 ATP5EP2Q5VTU8 51 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 DEFB107AQ8IZN7 70 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 UBE2D4Q9Y2X8 147 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 SETBP1Q9Y6X0 1596 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 C1orf167Q5SNV9 1468 aa1.37□□□□□ -2.19
CUL3-211ENST00000487558 MAGI3Q5TCQ9 1506 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 TRBV6-1A0A0K0K1D8 114 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 SSC5DA1L4H1 1573 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 ITSN1Q15811 1721 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 Q5BKY6 102 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 DEFB121Q5J5C9 76 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 Q6JHZ5 121 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 HEPN1Q6WQI6 88 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 C6orf201Q7Z4U5 140 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 LINC00472Q9H8W2 130 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 ASXL3Q9C0F0 2248 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 ATP7BP35670 1465 aa1.36□□□□□ -2.19
CUL3-211ENST00000487558 HAMPP81172 84 aa1.35□□□□□ -2.19
CUL3-211ENST00000487558 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
CUL3-211ENST00000487558 KIAA0556O60303 1618 aa1.35□□□□□ -2.19
CUL3-211ENST00000487558 EFCAB5A4FU69 1503 aa1.35□□□□□ -2.19
CUL3-211ENST00000487558 URB2Q14146 1524 aaKnown RBP1.35□□□□□ -2.19
CUL3-211ENST00000487558 A0A1B0GUT8 65 aa1.34□□□□□ -2.19
CUL3-211ENST00000487558 G3V318 75 aa1.34□□□□□ -2.19
CUL3-211ENST00000487558 S100A3P33764 101 aa1.34□□□□□ -2.19
CUL3-211ENST00000487558 S100ZQ8WXG8 99 aa1.34□□□□□ -2.19
CUL3-211ENST00000487558 PROK2Q9HC23 129 aa1.34□□□□□ -2.19
CUL3-211ENST00000487558 A0A0G2JMZ2 1700 aa1.34□□□□□ -2.2
CUL3-211ENST00000487558 NHSL1Q5SYE7 1610 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 CCDC180Q9P1Z9 1646 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 UBR3Q6ZT12 1888 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 A0A087WXM4 84 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 K7EIL1 84 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 SPATA8Q6RVD6 105 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 PLAC8Q9NZF1 115 aa1.33□□□□□ -2.2
CUL3-211ENST00000487558 COL14A1Q05707 1796 aaKnown RBP1.33□□□□□ -2.2
CUL3-211ENST00000487558 CFAP43Q8NDM7 1665 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 HFM1A2PYH4 1435 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 TIAM2Q8IVF5 1701 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 BCORQ6W2J9 1755 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 ZFHX3Q15911 3703 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 SAMD9Q5K651 1589 aa1.32□□□□□ -2.2
CUL3-211ENST00000487558 ERCC6L2Q5T890 1561 aa1.31□□□□□ -2.2
CUL3-211ENST00000487558 MADDQ8WXG6 1647 aa1.31□□□□□ -2.2
CUL3-211ENST00000487558 IFI27P40305 119 aaPredicted RBP1.31□□□□□ -2.2
CUL3-211ENST00000487558 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
CUL3-211ENST00000487558 GOLGA4Q13439 2230 aaKnown RBP1.31□□□□□ -2.2
CUL3-211ENST00000487558 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
CUL3-211ENST00000487558 TIAM1Q13009 1591 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 CEP170BQ9Y4F5 1589 aaPredicted RBP1.3□□□□□ -2.2
CUL3-211ENST00000487558 LRP6O75581 1613 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 A0A1B0GU69 56 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 NDUFB1O75438 58 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 SPINK7P58062 85 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 SPINK9Q5DT21 86 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 JMJD1CQ15652 2540 aa1.3□□□□□ -2.2
CUL3-211ENST00000487558 PAPPAQ13219 1627 aa1.29□□□□□ -2.2
CUL3-211ENST00000487558 CICQ96RK0 1608 aaPredicted RBP1.29□□□□□ -2.2
CUL3-211ENST00000487558 WIZO95785 1651 aa1.29□□□□□ -2.2
CUL3-211ENST00000487558 LRRC37AA6NMS7 1700 aa1.29□□□□□ -2.2
CUL3-211ENST00000487558 POLR1AO95602 1720 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms