RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 TMEM238C9JI98 176 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 APCSP02743 223 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 GIPP09681 153 aaPredicted RBP2.08□□□□□ -2.08
CNN3-206ENST00000487539 TAS2R45P59539 299 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 IL18Q14116 193 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 ATP6V1FQ16864 119 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 GATD1Q8NB37 220 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 OR10D4PQ8NGN7 298 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 SLC25A21Q9BQT8 299 aaPredicted RBP2.08□□□□□ -2.08
CNN3-206ENST00000487539 MRPS26Q9BYN8 205 aaKnown RBP2.08□□□□□ -2.08
CNN3-206ENST00000487539 RNASE7Q9H1E1 156 aaKnown RBP2.08□□□□□ -2.08
CNN3-206ENST00000487539 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 CCDC160A6NGH7 325 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 ZNF727A8MUV8 499 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 FAM25EA8MYX2 175 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 IGLV6-57P01721 117 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 ZNF25P17030 456 aaPredicted RBP2.07□□□□□ -2.08
CNN3-206ENST00000487539 GCHFRP30047 84 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 MRPS10P82664 201 aaKnown RBP2.07□□□□□ -2.08
CNN3-206ENST00000487539 IL15RAQ13261 267 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 ERASQ7Z444 233 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 FAM19A1Q7Z5A9 133 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 AP3S1Q92572 193 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 BTF3L4Q96K17 158 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 AP1S3Q96PC3 154 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 TP73-AS1Q9UF72 201 aa2.07□□□□□ -2.08
CNN3-206ENST00000487539 IGHV3OR16-9A0A0B4J2B5 98 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 A6NN06 94 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 PEX7O00628 323 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 HBG1P69891 147 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 HBG2P69892 147 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 STX12Q86Y82 276 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 CBLN2Q8IUK8 224 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 FAM19A2Q8N3H0 131 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 C15orf40Q8WUR7 153 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 HIGD2AQ9BW72 106 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 VCX3AQ9NNX9 186 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 TMEM242Q9NWH2 141 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
CNN3-206ENST00000487539 TRBV30A0A0K0K1B3 111 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 C20orf202A1L168 122 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 SDHAF1A6NFY7 115 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 INMT-MINDY4F8WBC2 141 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 F8WDY8 70 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 RGS5O15539 181 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 NCR2O95944 276 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 STAG3L2P0CL84 134 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 STAG3L3P0CL85 134 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 SPRR2DP22532 72 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 RPS20P60866 119 aaKnown RBP2.05□□□□□ -2.08
CNN3-206ENST00000487539 RPS29P62273 56 aaKnown RBP2.05□□□□□ -2.08
CNN3-206ENST00000487539 MOBPQ13875 183 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 LYZL1Q6UWQ5 148 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 Q6ZUT4 128 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 MRPL52Q86TS9 123 aaKnown RBP2.05□□□□□ -2.08
CNN3-206ENST00000487539 C20orf166-AS1Q96NR2 134 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 TPPP3Q9BW30 176 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 SMIM3Q9BZL3 60 aa2.05□□□□□ -2.08
CNN3-206ENST00000487539 A0A1W2PPV4 95 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 C17orf112F2Z3M2 114 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 M0R378 163 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 NOL3O60936 208 aaKnown RBP2.04□□□□□ -2.08
CNN3-206ENST00000487539 LTAP01374 205 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 IGLC6P0CF74 106 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 PMCHP20382 165 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 TMEM126AQ9H061 195 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 MED9Q9NWA0 146 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 ZFP30Q9Y2G7 519 aa2.04□□□□□ -2.08
CNN3-206ENST00000487539 I3L3M4 83 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 NDUFB6O95139 128 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 CXCL1P09341 107 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 PVALBP20472 110 aaPredicted RBP2.03□□□□□ -2.08
CNN3-206ENST00000487539 NMUP48645 174 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 PYDC2Q56P42 97 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 KCNIP2Q9NS61 270 aa2.03□□□□□ -2.08
CNN3-206ENST00000487539 A0A1W2PRE2 83 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 CDC34P49427 236 aaPredicted RBP2.02□□□□□ -2.09
CNN3-206ENST00000487539 DEFB116Q30KQ4 102 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 TOMM5Q8N4H5 51 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 Q8NDZ9 215 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 MRAP2Q96G30 205 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 SEC22CQ9BRL7 303 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 V9GYH0 126 aa2.02□□□□□ -2.09
CNN3-206ENST00000487539 SIX6O95475 246 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 BTCP35070 178 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 FAUP35544 74 aaKnown RBP2.01□□□□□ -2.09
CNN3-206ENST00000487539 IFITM3Q01628 133 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 ZNF726P1Q15940 193 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 SMCR5Q8TEV8 140 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 DEDD2Q8WXF8 326 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 FMC1Q96HJ9 113 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 CCDC32Q9BV29 185 aa2.01□□□□□ -2.09
CNN3-206ENST00000487539 C7orf77A4D0Y5 90 aa2□□□□□ -2.09
CNN3-206ENST00000487539 ERC2-IT1O76042 136 aa2□□□□□ -2.09
CNN3-206ENST00000487539 S100A5P33763 92 aa2□□□□□ -2.09
CNN3-206ENST00000487539 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms