RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
MCF2L-228ENST00000487354 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
MCF2L-228ENST00000487354 F8VRH5 84 aa8.75□□□□□ -1.01
MCF2L-228ENST00000487354 PPBPP02775 128 aa8.75□□□□□ -1.01
MCF2L-228ENST00000487354 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
MCF2L-228ENST00000487354 ALKBH7Q9BT30 221 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-228ENST00000487354 PRSS47A8MTI9 375 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 C9JQL5 133 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 CTAG1AP78358 180 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 ADIRFQ15847 76 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 C2orf66Q6UXQ4 117 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 CDKN2A-AS1Q9UH64 79 aa8.74□□□□□ -1.01
MCF2L-228ENST00000487354 RAB5AP20339 215 aa8.73□□□□□ -1.01
MCF2L-228ENST00000487354 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-228ENST00000487354 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
MCF2L-228ENST00000487354 ORMDL3Q8N138 153 aa8.73□□□□□ -1.01
MCF2L-228ENST00000487354 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
MCF2L-228ENST00000487354 IGIPA6NJ69 53 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 F8W036 122 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 SCO1O75880 301 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 UBE2AP49459 152 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
MCF2L-228ENST00000487354 IGKV2D-26A0A0A0MRZ7 120 aa8.71□□□□□ -1.02
MCF2L-228ENST00000487354 LINC01547P58512 204 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-228ENST00000487354 PRLHP81277 87 aa8.71□□□□□ -1.02
MCF2L-228ENST00000487354 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.02
MCF2L-228ENST00000487354 NAT8Q9UHE5 227 aa8.7□□□□□ -1.02
MCF2L-228ENST00000487354 CYSLTR1Q9Y271 337 aa8.7□□□□□ -1.02
MCF2L-228ENST00000487354 LOC389332A0A1B0GUA5 103 aa8.69□□□□□ -1.02
MCF2L-228ENST00000487354 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
MCF2L-228ENST00000487354 S100A8P05109 93 aa8.69□□□□□ -1.02
MCF2L-228ENST00000487354 NPSP0C0P6 89 aa8.69□□□□□ -1.02
MCF2L-228ENST00000487354 VCX2Q9H322 139 aa8.69□□□□□ -1.02
MCF2L-228ENST00000487354 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
MCF2L-228ENST00000487354 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
MCF2L-228ENST00000487354 CXCL5P42830 114 aa8.68□□□□□ -1.02
MCF2L-228ENST00000487354 HERVK_113P63121 156 aa8.68□□□□□ -1.02
MCF2L-228ENST00000487354 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
MCF2L-228ENST00000487354 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
MCF2L-228ENST00000487354 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-228ENST00000487354 Q8N8P6 123 aa8.67□□□□□ -1.02
MCF2L-228ENST00000487354 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
MCF2L-228ENST00000487354 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
MCF2L-228ENST00000487354 ATP5L2Q7Z4Y8 100 aa8.65□□□□□ -1.02
MCF2L-228ENST00000487354 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
MCF2L-228ENST00000487354 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.02
MCF2L-228ENST00000487354 LAMTOR2Q9Y2Q5 125 aa8.65□□□□□ -1.02
MCF2L-228ENST00000487354 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
MCF2L-228ENST00000487354 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
MCF2L-228ENST00000487354 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 M0R378 163 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 SEC11AP67812 179 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 Q8NDZ9 215 aa8.63□□□□□ -1.03
MCF2L-228ENST00000487354 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
MCF2L-228ENST00000487354 VPREB1P12018 145 aa8.62□□□□□ -1.03
MCF2L-228ENST00000487354 RAB5BP61020 215 aa8.62□□□□□ -1.03
MCF2L-228ENST00000487354 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
MCF2L-228ENST00000487354 TIMM17AQ99595 171 aa8.62□□□□□ -1.03
MCF2L-228ENST00000487354 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
MCF2L-228ENST00000487354 LINC00337Q8N6G1 96 aa8.6□□□□□ -1.03
MCF2L-228ENST00000487354 K7EMI3 77 aa8.59□□□□□ -1.03
MCF2L-228ENST00000487354 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
MCF2L-228ENST00000487354 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
MCF2L-228ENST00000487354 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
MCF2L-228ENST00000487354 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
MCF2L-228ENST00000487354 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
MCF2L-228ENST00000487354 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
MCF2L-228ENST00000487354 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
MCF2L-228ENST00000487354 AKAP14Q86UN6 197 aa8.57□□□□□ -1.04
MCF2L-228ENST00000487354 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
MCF2L-228ENST00000487354 DAND5Q8N907 189 aa8.56□□□□□ -1.04
MCF2L-228ENST00000487354 Q8NBF4 154 aa8.56□□□□□ -1.04
MCF2L-228ENST00000487354 SND1-IT1Q9HBX3 110 aa8.56□□□□□ -1.04
MCF2L-228ENST00000487354 MT1HP80294 61 aa8.55□□□□□ -1.04
MCF2L-228ENST00000487354 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
MCF2L-228ENST00000487354 NXT2Q9NPJ8 142 aaKnown RBP8.55□□□□□ -1.04
MCF2L-228ENST00000487354 PFN2P35080 140 aa8.54□□□□□ -1.04
MCF2L-228ENST00000487354 ERASQ7Z444 233 aa8.54□□□□□ -1.04
MCF2L-228ENST00000487354 GNB1LQ9BYB4 327 aa8.54□□□□□ -1.04
MCF2L-228ENST00000487354 PEA15Q15121 130 aa8.53□□□□□ -1.04
MCF2L-228ENST00000487354 XP32Q5T750 250 aa8.53□□□□□ -1.04
MCF2L-228ENST00000487354 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
MCF2L-228ENST00000487354 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
MCF2L-228ENST00000487354 ATP5LO75964 103 aa8.51□□□□□ -1.05
MCF2L-228ENST00000487354 SCGB3A1Q96QR1 104 aa8.51□□□□□ -1.05
MCF2L-228ENST00000487354 ERG28Q9UKR5 140 aa8.5□□□□□ -1.05
MCF2L-228ENST00000487354 SPINK1P00995 79 aa8.49□□□□□ -1.05
MCF2L-228ENST00000487354 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
MCF2L-228ENST00000487354 RAB14P61106 215 aa8.49□□□□□ -1.05
MCF2L-228ENST00000487354 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
MCF2L-228ENST00000487354 Q8N377 158 aa8.49□□□□□ -1.05
MCF2L-228ENST00000487354 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
MCF2L-228ENST00000487354 G0S2P27469 103 aa8.48□□□□□ -1.05
MCF2L-228ENST00000487354 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
MCF2L-228ENST00000487354 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms