RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CDK2AP2O75956 126 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 AKR1D1P51857 326 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 MAJINQ3KP22 176 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 PRSS2P07478 247 aa8.3□□□□□ -1.08
HDAC6-229ENST00000486665 C6orf226Q5I0X4 101 aa8.3□□□□□ -1.08
HDAC6-229ENST00000486665 C10orf25Q5T742 122 aa8.3□□□□□ -1.08
HDAC6-229ENST00000486665 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
HDAC6-229ENST00000486665 Q8IZM0 81 aa8.3□□□□□ -1.08
HDAC6-229ENST00000486665 LEPROTO15243 131 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 TSPEAR-AS2P59090 65 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 HERVK_113P61574 105 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 ANKRD39Q53RE8 183 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
HDAC6-229ENST00000486665 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
HDAC6-229ENST00000486665 E9PLD3 99 aa8.28□□□□□ -1.08
HDAC6-229ENST00000486665 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
HDAC6-229ENST00000486665 SYCNQ0VAF6 134 aa8.28□□□□□ -1.08
HDAC6-229ENST00000486665 Q6ZRU5 148 aa8.28□□□□□ -1.08
HDAC6-229ENST00000486665 CAMK2N2Q96S95 79 aa8.28□□□□□ -1.08
HDAC6-229ENST00000486665 CDPF1Q6NVV7 123 aa8.27□□□□□ -1.09
HDAC6-229ENST00000486665 Q8N1X5 172 aa8.27□□□□□ -1.09
HDAC6-229ENST00000486665 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
HDAC6-229ENST00000486665 F8WDY8 70 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 J3QQQ9 107 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 NDUFA1O15239 70 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 CKS1BP61024 79 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 LINC01620Q4KN68 170 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
HDAC6-229ENST00000486665 IGLV5-52A0A0A0MRZ9 124 aa8.25□□□□□ -1.09
HDAC6-229ENST00000486665 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-229ENST00000486665 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
HDAC6-229ENST00000486665 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
HDAC6-229ENST00000486665 FAT1Q14517 4588 aa8.25□□□□□ -1.09
HDAC6-229ENST00000486665 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-229ENST00000486665 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
HDAC6-229ENST00000486665 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
HDAC6-229ENST00000486665 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
HDAC6-229ENST00000486665 HSBP1L1C9JCN9 74 aa8.23□□□□□ -1.09
HDAC6-229ENST00000486665 LGALS3P17931 250 aaKnown RBP8.23□□□□□ -1.09
HDAC6-229ENST00000486665 CXCL5P42830 114 aa8.23□□□□□ -1.09
HDAC6-229ENST00000486665 NMUP48645 174 aa8.23□□□□□ -1.09
HDAC6-229ENST00000486665 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
HDAC6-229ENST00000486665 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-229ENST00000486665 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
HDAC6-229ENST00000486665 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
HDAC6-229ENST00000486665 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
HDAC6-229ENST00000486665 MYMXA0A1B0GTQ4 84 aa8.21□□□□□ -1.1
HDAC6-229ENST00000486665 VAMP8Q9BV40 100 aa8.21□□□□□ -1.1
HDAC6-229ENST00000486665 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.1
HDAC6-229ENST00000486665 GCSHP23434 173 aa8.2□□□□□ -1.1
HDAC6-229ENST00000486665 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
HDAC6-229ENST00000486665 SPATA45Q537H7 98 aa8.2□□□□□ -1.1
HDAC6-229ENST00000486665 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
HDAC6-229ENST00000486665 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
HDAC6-229ENST00000486665 ZNF815PA8K554 130 aa8.19□□□□□ -1.1
HDAC6-229ENST00000486665 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-229ENST00000486665 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
HDAC6-229ENST00000486665 PFN2P35080 140 aa8.18□□□□□ -1.1
HDAC6-229ENST00000486665 HERV-K104P63124 156 aa8.18□□□□□ -1.1
HDAC6-229ENST00000486665 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
HDAC6-229ENST00000486665 ERG28Q9UKR5 140 aa8.18□□□□□ -1.1
HDAC6-229ENST00000486665 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 Q6ZRP5 223 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 TP73-AS1Q9UF72 201 aa8.17□□□□□ -1.1
HDAC6-229ENST00000486665 A0A096LNI7 61 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 PANO1I0J062 215 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 COX8AP10176 69 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 GAGE2BQ13066 116 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
HDAC6-229ENST00000486665 LINC00158P58513 81 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
HDAC6-229ENST00000486665 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
HDAC6-229ENST00000486665 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
HDAC6-229ENST00000486665 PTTG1IPP53801 180 aa8.14□□□□□ -1.11
HDAC6-229ENST00000486665 XGP55808 180 aa8.14□□□□□ -1.11
HDAC6-229ENST00000486665 COX17Q14061 63 aa8.14□□□□□ -1.11
HDAC6-229ENST00000486665 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
HDAC6-229ENST00000486665 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-229ENST00000486665 S100A12P80511 92 aa8.13□□□□□ -1.11
HDAC6-229ENST00000486665 LITAFQ99732 161 aa8.13□□□□□ -1.11
HDAC6-229ENST00000486665 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
HDAC6-229ENST00000486665 LINC00587B1AMM8 73 aa8.12□□□□□ -1.11
HDAC6-229ENST00000486665 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
HDAC6-229ENST00000486665 DLEU1O43261 78 aa8.12□□□□□ -1.11
HDAC6-229ENST00000486665 C9orf129Q5T035 196 aaKnown RBP8.12□□□□□ -1.11
HDAC6-229ENST00000486665 MIR7-3HGQ8N6C7 128 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms