RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ORAOV1Q8WV07 137 aa13.81□□□□□ -0.2
SREBF1-214ENST00000486311 MRPL35Q9NZE8 188 aaKnown RBP13.81□□□□□ -0.2
SREBF1-214ENST00000486311 TOMM6Q96B49 74 aa13.8□□□□□ -0.2
SREBF1-214ENST00000486311 IFITM10A6NMD0 228 aa13.79□□□□□ -0.2
SREBF1-214ENST00000486311 PSORS1C2Q9UIG4 136 aa13.79□□□□□ -0.2
SREBF1-214ENST00000486311 NPSP0C0P6 89 aa13.77□□□□□ -0.21
SREBF1-214ENST00000486311 LINC00310P59036 64 aa13.77□□□□□ -0.21
SREBF1-214ENST00000486311 PHF5AQ7RTV0 110 aaKnown RBP13.77□□□□□ -0.21
SREBF1-214ENST00000486311 PYGO1Q9Y3Y4 419 aa13.77□□□□□ -0.21
SREBF1-214ENST00000486311 NDUFA1O15239 70 aa13.76□□□□□ -0.21
SREBF1-214ENST00000486311 PMCHL1Q16048 86 aa13.76□□□□□ -0.21
SREBF1-214ENST00000486311 PAPPA-AS1Q5QFB9 102 aa13.76□□□□□ -0.21
SREBF1-214ENST00000486311 SCGB3A1Q96QR1 104 aa13.76□□□□□ -0.21
SREBF1-214ENST00000486311 ATP5LO75964 103 aa13.75□□□□□ -0.21
SREBF1-214ENST00000486311 C10orf25Q5T742 122 aa13.75□□□□□ -0.21
SREBF1-214ENST00000486311 ERASQ7Z444 233 aa13.75□□□□□ -0.21
SREBF1-214ENST00000486311 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
SREBF1-214ENST00000486311 TIMM17AQ99595 171 aa13.75□□□□□ -0.21
SREBF1-214ENST00000486311 RNF213Q63HN8 5207 aa13.74□□□□□ -0.21
SREBF1-214ENST00000486311 NUPR1O60356 82 aa13.74□□□□□ -0.21
SREBF1-214ENST00000486311 TLX1NBP0CAT3 122 aa13.74□□□□□ -0.21
SREBF1-214ENST00000486311 Q6ZN92 141 aa13.74□□□□□ -0.21
SREBF1-214ENST00000486311 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
SREBF1-214ENST00000486311 A0A096LNJ9 63 aa13.73□□□□□ -0.21
SREBF1-214ENST00000486311 PDZD11Q5EBL8 140 aa13.73□□□□□ -0.21
SREBF1-214ENST00000486311 UNQ6190/PRO20217Q6UXQ8 127 aa13.73□□□□□ -0.21
SREBF1-214ENST00000486311 C6orf48Q9UBA6 75 aa13.73□□□□□ -0.21
SREBF1-214ENST00000486311 HSPB8Q9UJY1 196 aa13.73□□□□□ -0.21
SREBF1-214ENST00000486311 IGLV4-3A0A075B6K6 122 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 A0A087WZ39 114 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 IGIPA6NJ69 53 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 LEPROTL1O95214 131 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 S100A2P29034 98 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 C1orf137Q5JT78 98 aa13.72□□□□□ -0.21
SREBF1-214ENST00000486311 PACRGQ96M98 296 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-214ENST00000486311 TMA7Q9Y2S6 64 aaKnown RBP13.72□□□□□ -0.21
SREBF1-214ENST00000486311 KIAA0087Q14695 138 aa13.71□□□□□ -0.21
SREBF1-214ENST00000486311 LINC00242Q5T6M2 205 aa13.71□□□□□ -0.21
SREBF1-214ENST00000486311 FAM168BA1KXE4 195 aa13.69□□□□□ -0.22
SREBF1-214ENST00000486311 C2orf88Q9BSF0 95 aa13.69□□□□□ -0.22
SREBF1-214ENST00000486311 TEX43Q6ZNM6 134 aa13.68□□□□□ -0.22
SREBF1-214ENST00000486311 VCX2Q9H322 139 aa13.68□□□□□ -0.22
SREBF1-214ENST00000486311 SNRPEP62304 92 aaKnown RBP13.67□□□□□ -0.22
SREBF1-214ENST00000486311 IFI27L1Q96BM0 104 aa13.67□□□□□ -0.22
SREBF1-214ENST00000486311 C5orf52A6NGY3 159 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 IGLV7-43P04211 117 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 FABP4P15090 132 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 GAGE2EQ4V326 116 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 GAGE2DQ9UEU5 116 aa13.66□□□□□ -0.22
SREBF1-214ENST00000486311 UBE2D1P51668 147 aa13.65□□□□□ -0.22
SREBF1-214ENST00000486311 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-214ENST00000486311 KRTAP11-1Q8IUC1 163 aa13.65□□□□□ -0.22
SREBF1-214ENST00000486311 LINC01561Q8N1V8 128 aa13.65□□□□□ -0.22
SREBF1-214ENST00000486311 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
SREBF1-214ENST00000486311 KRTAP7-1Q8IUC3 87 aa13.64□□□□□ -0.23
SREBF1-214ENST00000486311 DIRC1Q969H9 104 aa13.64□□□□□ -0.23
SREBF1-214ENST00000486311 MAP1LC3CQ9BXW4 147 aa13.64□□□□□ -0.23
SREBF1-214ENST00000486311 PMVKQ15126 192 aa13.63□□□□□ -0.23
SREBF1-214ENST00000486311 AMELXQ99217 191 aa13.63□□□□□ -0.23
SREBF1-214ENST00000486311 C2orf82Q6UX34 121 aa13.62□□□□□ -0.23
SREBF1-214ENST00000486311 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
SREBF1-214ENST00000486311 LINC00173Q6ZV60 143 aa13.61□□□□□ -0.23
SREBF1-214ENST00000486311 SEC11AP67812 179 aa13.6□□□□□ -0.23
SREBF1-214ENST00000486311 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
SREBF1-214ENST00000486311 HIST1H2BLQ99880 126 aa13.6□□□□□ -0.23
SREBF1-214ENST00000486311 TRAV12-1A0A0B4J245 112 aa13.59□□□□□ -0.23
SREBF1-214ENST00000486311 H0Y9J4 135 aa13.59□□□□□ -0.23
SREBF1-214ENST00000486311 M0QXV9 152 aa13.59□□□□□ -0.23
SREBF1-214ENST00000486311 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
SREBF1-214ENST00000486311 C9orf129Q5T035 196 aaKnown RBP13.58□□□□□ -0.24
SREBF1-214ENST00000486311 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
SREBF1-214ENST00000486311 PRR26Q8N8Z3 221 aa13.57□□□□□ -0.24
SREBF1-214ENST00000486311 H0Y8G0 127 aa13.56□□□□□ -0.24
SREBF1-214ENST00000486311 UBE2BP63146 152 aa13.56□□□□□ -0.24
SREBF1-214ENST00000486311 SYS1-DBNDD2H3BUS1 97 aa13.55□□□□□ -0.24
SREBF1-214ENST00000486311 PRSS2P07478 247 aa13.55□□□□□ -0.24
SREBF1-214ENST00000486311 KRTDAPP60985 99 aa13.55□□□□□ -0.24
SREBF1-214ENST00000486311 PET117Q6UWS5 81 aa13.55□□□□□ -0.24
SREBF1-214ENST00000486311 CHTOPQ9Y3Y2 248 aaKnown RBP13.55□□□□□ -0.24
SREBF1-214ENST00000486311 GEMIN7Q9H840 131 aaKnown RBP13.54□□□□□ -0.24
SREBF1-214ENST00000486311 LPAP08519 4548 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 C20orf202A1L168 122 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 F8VRH5 84 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 C3orf79P0CE67 100 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 CKS1BP61024 79 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 HERVK_113P63121 156 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 Q8IZM0 81 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 TOMM7Q9P0U1 55 aa13.53□□□□□ -0.24
SREBF1-214ENST00000486311 AKR1D1P51857 326 aa13.52□□□□□ -0.25
SREBF1-214ENST00000486311 C6orf226Q5I0X4 101 aa13.52□□□□□ -0.25
SREBF1-214ENST00000486311 IGLV1-50A0A075B6I6 118 aa13.51□□□□□ -0.25
SREBF1-214ENST00000486311 TINCRA0A1B0GVN0 87 aa13.51□□□□□ -0.25
SREBF1-214ENST00000486311 KRTAP1-4P0C5Y4 121 aa13.51□□□□□ -0.25
SREBF1-214ENST00000486311 IGLC3P0DOY3 106 aa13.5□□□□□ -0.25
SREBF1-214ENST00000486311 PLNP26678 52 aa13.49□□□□□ -0.25
SREBF1-214ENST00000486311 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
SREBF1-214ENST00000486311 DPM2O94777 84 aa13.47□□□□□ -0.25
SREBF1-214ENST00000486311 LINC01545Q5VT33 79 aa13.47□□□□□ -0.25
SREBF1-214ENST00000486311 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms