RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
XRN1-212ENST00000486211 NRACQ8N912 160 aa4.38□□□□□ -1.71
XRN1-212ENST00000486211 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
XRN1-212ENST00000486211 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
XRN1-212ENST00000486211 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
XRN1-212ENST00000486211 PFDN1O60925 122 aa4.37□□□□□ -1.71
XRN1-212ENST00000486211 FCER1GP30273 86 aa4.37□□□□□ -1.71
XRN1-212ENST00000486211 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
XRN1-212ENST00000486211 C11orf52Q96A22 123 aa4.37□□□□□ -1.71
XRN1-212ENST00000486211 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 VCYO14598 125 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 SLC25A20O43772 301 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 SCO1O75880 301 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 RPL39P62891 51 aaKnown RBP4.36□□□□□ -1.71
XRN1-212ENST00000486211 FAM19A1Q7Z5A9 133 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 SMIM12Q96EX1 92 aa4.36□□□□□ -1.71
XRN1-212ENST00000486211 TRBV20OR9-2A0A075B6H5 130 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 TMEM238C9JI98 176 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 SSNA1O43805 119 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 MT2AP02795 61 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 HBBP68871 147 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
XRN1-212ENST00000486211 CBLN2Q8IUK8 224 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 TMEM126AQ9H061 195 aa4.35□□□□□ -1.71
XRN1-212ENST00000486211 BORCS7-ASMTA0A0B4J1R7 106 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 A0A1B0GV50 99 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 CCL20P78556 96 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 LINC01561Q8N1V8 128 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 MBD3L1Q8WWY6 194 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 TMEM18Q96B42 140 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 SPANXA1Q9NS26 97 aa4.34□□□□□ -1.71
XRN1-212ENST00000486211 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 M0R378 163 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 RAB4AP20338 218 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 GNG4P50150 75 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 CKS1BP61024 79 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 Q5BKY6 102 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 KCNRGQ8N5I3 272 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 ENKURQ8TC29 256 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 SFT2D1Q8WV19 159 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 HIGD2AQ9BW72 106 aa4.33□□□□□ -1.72
XRN1-212ENST00000486211 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 MT1FP04733 61 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 Q8IZM0 81 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 LINC00846Q9NV44 126 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 TOMM7Q9P0U1 55 aa4.32□□□□□ -1.72
XRN1-212ENST00000486211 F8VRH5 84 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 PRSS2P07478 247 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 AMN1Q8IY45 258 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 TMEM191AQ9H0A3 160 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 BIN3Q9NQY0 253 aa4.31□□□□□ -1.72
XRN1-212ENST00000486211 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
XRN1-212ENST00000486211 K7EN84 100 aa4.29□□□□□ -1.72
XRN1-212ENST00000486211 LINC00483Q53H64 154 aa4.29□□□□□ -1.72
XRN1-212ENST00000486211 Q6ZN92 141 aa4.29□□□□□ -1.72
XRN1-212ENST00000486211 FAM213BQ8TBF2 198 aa4.29□□□□□ -1.72
XRN1-212ENST00000486211 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
XRN1-212ENST00000486211 GEMIN7Q9H840 131 aaKnown RBP4.29□□□□□ -1.72
XRN1-212ENST00000486211 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
XRN1-212ENST00000486211 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
XRN1-212ENST00000486211 A4D1N5 150 aa4.28□□□□□ -1.72
XRN1-212ENST00000486211 MOBPQ13875 183 aa4.28□□□□□ -1.72
XRN1-212ENST00000486211 PPP1R2P9O14990 202 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 PPP1R17O96001 155 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 VPREB1P12018 145 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
XRN1-212ENST00000486211 IFITM3Q01628 133 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 Q6Q795 121 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 MANBALQ9NQG1 85 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 GNG13Q9P2W3 67 aa4.27□□□□□ -1.73
XRN1-212ENST00000486211 LINC01551Q86U37 167 aa4.26□□□□□ -1.73
XRN1-212ENST00000486211 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
XRN1-212ENST00000486211 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 FXYD6-FXYD2A0A087WZ82 144 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 IGLV9-49A0A0B4J1Y8 123 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 TCAPO15273 167 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 CXCL5P42830 114 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 Q8NDZ9 215 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 OCC1Q8TAD7 63 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
XRN1-212ENST00000486211 TRBV24-1A0A075B6N3 115 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 A8MWL6 223 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 UMAD1C9J7I0 102 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 IFI27P40305 119 aaPredicted RBP4.24□□□□□ -1.73
XRN1-212ENST00000486211 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 EIF5A2Q9GZV4 153 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms