RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 FOXI1Q12951 378 aa8.1□□□□□ -1.11
HMG20B-211ENST00000486028 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
HMG20B-211ENST00000486028 Q6ZUT4 128 aa8.1□□□□□ -1.11
HMG20B-211ENST00000486028 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
HMG20B-211ENST00000486028 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 H0Y8G0 127 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 K7ERU9 68 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
HMG20B-211ENST00000486028 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 RNASE13Q5GAN3 156 aaKnown RBP8.09□□□□□ -1.11
HMG20B-211ENST00000486028 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 ERASQ7Z444 233 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
HMG20B-211ENST00000486028 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 Q8N1X5 172 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 C15orf56Q8N910 161 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 CYSLTR1Q9Y271 337 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
HMG20B-211ENST00000486028 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.07□□□□□ -1.12
HMG20B-211ENST00000486028 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
HMG20B-211ENST00000486028 K7EP34 96 aa8.07□□□□□ -1.12
HMG20B-211ENST00000486028 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
HMG20B-211ENST00000486028 Q6ZSA8 131 aa8.07□□□□□ -1.12
HMG20B-211ENST00000486028 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
HMG20B-211ENST00000486028 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
HMG20B-211ENST00000486028 HIGD1BQ9P298 99 aa8.07□□□□□ -1.12
HMG20B-211ENST00000486028 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
HMG20B-211ENST00000486028 COX7A2LO14548 114 aa8.06□□□□□ -1.12
HMG20B-211ENST00000486028 HIGD2BQ4VC39 106 aa8.06□□□□□ -1.12
HMG20B-211ENST00000486028 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
HMG20B-211ENST00000486028 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
HMG20B-211ENST00000486028 HAMPP81172 84 aa8.05□□□□□ -1.12
HMG20B-211ENST00000486028 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
HMG20B-211ENST00000486028 DNAH8Q96JB1 4490 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 B5MCH6 92 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 ATP5LO75964 103 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 SLPIP03973 132 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
HMG20B-211ENST00000486028 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
HMG20B-211ENST00000486028 SMR3BP02814 79 aaPredicted RBP8.03□□□□□ -1.12
HMG20B-211ENST00000486028 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
HMG20B-211ENST00000486028 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
HMG20B-211ENST00000486028 VCX2Q9H322 139 aa8.03□□□□□ -1.12
HMG20B-211ENST00000486028 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 IGIPA6NJ69 53 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 H3BUT2 72 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 APOMO95445 188 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 KRTAP4-5Q9BYR2 181 aa8.02□□□□□ -1.13
HMG20B-211ENST00000486028 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
HMG20B-211ENST00000486028 TAL2Q16559 108 aa8.01□□□□□ -1.13
HMG20B-211ENST00000486028 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
HMG20B-211ENST00000486028 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
HMG20B-211ENST00000486028 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
HMG20B-211ENST00000486028 IGHV3OR16-9A0A0B4J2B5 98 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 DPM2O94777 84 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 AMELXQ99217 191 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 TIMM17AQ99595 171 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 PCLOQ9Y6V0 5065 aa8□□□□□ -1.13
HMG20B-211ENST00000486028 IGKCP01834 107 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 FABP2P12104 132 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 NMUP48645 174 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 UBE2D1P51668 147 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 CIRBP-AS1Q8TBR5 109 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 DPH3Q96FX2 82 aa7.99□□□□□ -1.13
HMG20B-211ENST00000486028 IGLV4-69A0A075B6H9 119 aa7.98□□□□□ -1.13
HMG20B-211ENST00000486028 ZC2HC1BQ5TFG8 222 aa7.98□□□□□ -1.13
HMG20B-211ENST00000486028 Q5VSD8 79 aa7.98□□□□□ -1.13
HMG20B-211ENST00000486028 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
HMG20B-211ENST00000486028 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
HMG20B-211ENST00000486028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
HMG20B-211ENST00000486028 A0A087WZ39 114 aa7.97□□□□□ -1.13
HMG20B-211ENST00000486028 COX6A2Q02221 97 aa7.97□□□□□ -1.13
HMG20B-211ENST00000486028 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
HMG20B-211ENST00000486028 RAB37Q96AX2 223 aa7.97□□□□□ -1.13
HMG20B-211ENST00000486028 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
HMG20B-211ENST00000486028 FAT1Q14517 4588 aa7.96□□□□□ -1.13
HMG20B-211ENST00000486028 IGKV2D-26A0A0A0MRZ7 120 aa7.96□□□□□ -1.14
HMG20B-211ENST00000486028 CIRBPQ14011 172 aaKnown RBP7.96□□□□□ -1.14
HMG20B-211ENST00000486028 CEND1Q8N111 149 aa7.96□□□□□ -1.14
HMG20B-211ENST00000486028 CAMK2N2Q96S95 79 aa7.96□□□□□ -1.14
HMG20B-211ENST00000486028 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.14
HMG20B-211ENST00000486028 E9PLD3 99 aa7.95□□□□□ -1.14
HMG20B-211ENST00000486028 F8WDY8 70 aa7.95□□□□□ -1.14
HMG20B-211ENST00000486028 PANO1I0J062 215 aa7.95□□□□□ -1.14
HMG20B-211ENST00000486028 FXYD2P54710 66 aa7.95□□□□□ -1.14
HMG20B-211ENST00000486028 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
HMG20B-211ENST00000486028 NAA38Q9BRA0 125 aaKnown RBP7.95□□□□□ -1.14
HMG20B-211ENST00000486028 SRRM2Q9UQ35 2752 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms