RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FABP4P15090 132 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
HPS4-214ENST00000485842 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
HPS4-214ENST00000485842 MAJINQ3KP22 176 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 C6orf226Q5I0X4 101 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 Q8IZM0 81 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 SPACA4Q8TDM5 124 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
HPS4-214ENST00000485842 RYR1P21817 5038 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
HPS4-214ENST00000485842 TRAV12-1A0A0B4J245 112 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 CKS1BP61024 79 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
HPS4-214ENST00000485842 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
HPS4-214ENST00000485842 HERC2O95714 4834 aa7.54□□□□□ -1.2
HPS4-214ENST00000485842 A0A087WYN8 130 aa7.54□□□□□ -1.2
HPS4-214ENST00000485842 RNF151Q2KHN1 245 aa7.54□□□□□ -1.2
HPS4-214ENST00000485842 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
HPS4-214ENST00000485842 Q5VSD8 79 aa7.54□□□□□ -1.2
HPS4-214ENST00000485842 TRBV30A0A0K0K1B3 111 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 F8VRH5 84 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 PTTG1IPP53801 180 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 HSPG2P98160 4391 aa7.53□□□□□ -1.2
HPS4-214ENST00000485842 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
HPS4-214ENST00000485842 CXCL5P42830 114 aa7.52□□□□□ -1.21
HPS4-214ENST00000485842 ODF1Q14990 250 aa7.52□□□□□ -1.21
HPS4-214ENST00000485842 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
HPS4-214ENST00000485842 STPG4Q8N801 248 aa7.52□□□□□ -1.21
HPS4-214ENST00000485842 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
HPS4-214ENST00000485842 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 GAGE2EQ4V326 116 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 MAP1LC3CQ9BXW4 147 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 GAGE2DQ9UEU5 116 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
HPS4-214ENST00000485842 COA6Q5JTJ3 125 aaKnown RBP7.49□□□□□ -1.21
HPS4-214ENST00000485842 Q6ZRP5 223 aa7.49□□□□□ -1.21
HPS4-214ENST00000485842 PMCHL2Q9BQD1 86 aa7.49□□□□□ -1.21
HPS4-214ENST00000485842 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
HPS4-214ENST00000485842 NDUFC2-KCTD14E9PQ53 114 aa7.48□□□□□ -1.21
HPS4-214ENST00000485842 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
HPS4-214ENST00000485842 DPM2O94777 84 aa7.47□□□□□ -1.21
HPS4-214ENST00000485842 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
HPS4-214ENST00000485842 A6NJY4 79 aa7.46□□□□□ -1.22
HPS4-214ENST00000485842 PLNP26678 52 aa7.46□□□□□ -1.22
HPS4-214ENST00000485842 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
HPS4-214ENST00000485842 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
HPS4-214ENST00000485842 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
HPS4-214ENST00000485842 FAM168BA1KXE4 195 aa7.45□□□□□ -1.22
HPS4-214ENST00000485842 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
HPS4-214ENST00000485842 IGKCP01834 107 aa7.45□□□□□ -1.22
HPS4-214ENST00000485842 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
HPS4-214ENST00000485842 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
HPS4-214ENST00000485842 KRTDAPP60985 99 aa7.44□□□□□ -1.22
HPS4-214ENST00000485842 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
HPS4-214ENST00000485842 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
HPS4-214ENST00000485842 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
HPS4-214ENST00000485842 PFN2P35080 140 aa7.43□□□□□ -1.22
HPS4-214ENST00000485842 HERVK_113P61574 105 aa7.43□□□□□ -1.22
HPS4-214ENST00000485842 S100A6P06703 90 aa7.42□□□□□ -1.22
HPS4-214ENST00000485842 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
HPS4-214ENST00000485842 LINC01545Q5VT33 79 aa7.42□□□□□ -1.22
HPS4-214ENST00000485842 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
HPS4-214ENST00000485842 PHF5AQ7RTV0 110 aaKnown RBP7.42□□□□□ -1.22
HPS4-214ENST00000485842 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
HPS4-214ENST00000485842 S100A2P29034 98 aa7.41□□□□□ -1.22
HPS4-214ENST00000485842 SFTA2Q6UW10 78 aa7.41□□□□□ -1.22
HPS4-214ENST00000485842 M0QXV9 152 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 LEPROTO15243 131 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
HPS4-214ENST00000485842 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 PLEKHB2Q96CS7 222 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
HPS4-214ENST00000485842 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
HPS4-214ENST00000485842 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
HPS4-214ENST00000485842 MEIG1Q5JSS6 88 aa7.39□□□□□ -1.23
HPS4-214ENST00000485842 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
HPS4-214ENST00000485842 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
HPS4-214ENST00000485842 SRRM2Q9UQ35 2752 aaKnown RBP7.38□□□□□ -1.23
HPS4-214ENST00000485842 MYMXA0A1B0GTQ4 84 aa7.38□□□□□ -1.23
HPS4-214ENST00000485842 C20orf202A1L168 122 aa7.38□□□□□ -1.23
HPS4-214ENST00000485842 J3QQQ9 107 aa7.38□□□□□ -1.23
HPS4-214ENST00000485842 LGALS3P17931 250 aaKnown RBP7.38□□□□□ -1.23
HPS4-214ENST00000485842 LINC00158P58513 81 aa7.38□□□□□ -1.23
HPS4-214ENST00000485842 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
HPS4-214ENST00000485842 FAT1Q14517 4588 aa7.37□□□□□ -1.23
HPS4-214ENST00000485842 HERV-K104P63124 156 aa7.37□□□□□ -1.23
HPS4-214ENST00000485842 UBE2BP63146 152 aa7.37□□□□□ -1.23
HPS4-214ENST00000485842 COX17Q14061 63 aa7.37□□□□□ -1.23
HPS4-214ENST00000485842 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
HPS4-214ENST00000485842 E9PLD3 99 aa7.36□□□□□ -1.23
HPS4-214ENST00000485842 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
HPS4-214ENST00000485842 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms