RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 NANOS2P60321 138 aaKnown RBP3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 KHDC1LQ5JSQ8 128 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 TMEM86BQ8N661 226 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 LINC00612Q8N6U2 182 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 LAMA5O15230 3695 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 LOC110117498A0A087WWA1 95 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 DNAJC9-AS1A6NH13 148 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 TMEM256-PLSCR3K7ERE1 68 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 IGHV4-31P0DP07 118 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 COX17Q14061 63 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 Q8N814 137 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 MUC7Q8TAX7 377 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 TOMM7Q9P0U1 55 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 SPTBN1Q01082 2364 aaKnown RBP3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 CEP295Q9C0D2 2601 aa3.23□□□□□ -1.89
SMARCC1-206ENST00000485737 IGHV4-28A0A0C4DH34 117 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 A0A1B0GUV1 79 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 H3BQ85 93 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 Q5XG85 94 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 C6orf223Q8N319 242 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 CSNK1G2-AS1Q8NCQ2 148 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 KIR2DL5BQ8NHK3 375 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 DSCR8Q96T75 97 aa3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 NOP10Q9NPE3 64 aaKnown RBP3.22□□□□□ -1.89
SMARCC1-206ENST00000485737 MED13LQ71F56 2210 aa3.21□□□□□ -1.89
SMARCC1-206ENST00000485737 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 SPTA1P02549 2419 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 TRGV2A0A075B6R0 118 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 TRAV7A0A075B6U4 112 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 TRGV4A0A0C4DH28 118 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 FAM236DA0A1B0GTK5 79 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 FAM236CP0DP71 79 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 PDE6GP18545 87 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 PFN2P35080 140 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 HILS1P60008 231 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 Q6ZQT0 140 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 UBL5Q9BZL1 73 aa3.21□□□□□ -1.9
SMARCC1-206ENST00000485737 MUC6Q6W4X9 2439 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 CCL24O00175 119 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 XCL1P47992 114 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 CXCL6P80162 114 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 ENHOQ6UWT2 76 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 LINC00575Q6W349 94 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 HIVEP3Q5T1R4 2406 aa3.2□□□□□ -1.9
SMARCC1-206ENST00000485737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.19□□□□□ -1.95e-8■■■■□ 19.4
SMARCC1-206ENST00000485737 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 IGKV3OR2-268A0A0C4DH90 116 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 H7BZZ5 65 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 CD164L2Q6UWJ8 174 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 MRAPQ8TCY5 172 aa3.19□□□□□ -1.9
SMARCC1-206ENST00000485737 CELSR1Q9NYQ6 3014 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 KRTAP29-1A8MX34 341 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 NDUFC1O43677 76 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 IGLV6-57P01721 117 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 PLA2G2AP14555 144 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 LINC01547P58512 204 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 RBM3P98179 157 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 C20orf197Q8N268 126 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 Q8NDZ9 215 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 C11orf68Q9H3H3 251 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 IGF2RP11717 2491 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 RIF1Q5UIP0 2472 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 COL6A6A6NMZ7 2263 aa3.18□□□□□ -1.9
SMARCC1-206ENST00000485737 SPTAN1Q13813 2472 aaKnown RBP3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 GVQW2A0A096LPI5 108 aaPredicted RBP3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 A0A0J9YWU9 116 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 TRBV7-6A0A0J9YX20 115 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 TRBV7-4A0A0J9YYF1 115 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 Q6ZVQ6 151 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 MAPK1IP1LQ8NDC0 245 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 WFDC9Q8NEX5 89 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 C16orf95Q9H693 158 aa3.17□□□□□ -1.9
SMARCC1-206ENST00000485737 ATRXP46100 2492 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 RELNP78509 3460 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 RPL35AP18077 110 aaKnown RBP3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 DEFB113Q30KQ7 82 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 WFDC10AQ9H1F0 79 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 PRO0255Q9UI72 69 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 SVEP1Q4LDE5 3571 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 AKAP6Q13023 2319 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms