RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 TMEM191AQ9H0A3 160 aa3.49□□□□□ -1.85
PTPRT-208ENST00000485499 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
PTPRT-208ENST00000485499 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 ESDP10768 282 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 RAB4AP20338 218 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
PTPRT-208ENST00000485499 TRBV27A0A0K0K1C4 114 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 IGLV7-43P04211 117 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 CKS2P33552 79 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 POLR2KP53803 58 aaKnown RBP3.47□□□□□ -1.85
PTPRT-208ENST00000485499 DSCR10P59022 87 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 SPAG11BQ08648 103 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 ADIRFQ15847 76 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 LINC01551Q86U37 167 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 NUP35Q8NFH5 326 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 OSTCQ9NRP0 149 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
PTPRT-208ENST00000485499 A0A087WZ39 114 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 NDUFA1O15239 70 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 TCAPO15273 167 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 MRPL51Q4U2R6 128 aaKnown RBP3.46□□□□□ -1.86
PTPRT-208ENST00000485499 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
PTPRT-208ENST00000485499 Q6ZUT4 128 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 ORAOV1Q8WV07 137 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 C2orf48Q96LS8 159 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 IMMP2LQ96T52 175 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 UBE2D4Q9Y2X8 147 aa3.46□□□□□ -1.86
PTPRT-208ENST00000485499 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
PTPRT-208ENST00000485499 TGIF2-C20orf24A0A0A6YYL0 155 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 A0A1W2PNN7 141 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 F8W036 122 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 S100A8P05109 93 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 SRP19P09132 144 aaKnown RBP3.45□□□□□ -1.86
PTPRT-208ENST00000485499 RAB5AP20339 215 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 RPL39P62891 51 aaKnown RBP3.45□□□□□ -1.86
PTPRT-208ENST00000485499 HBBP68871 147 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 FAM74A3Q4VXF1 159 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 FAM104BQ5XKR9 115 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
PTPRT-208ENST00000485499 FAM19A5Q7Z5A7 132 aaPredicted RBP3.45□□□□□ -1.86
PTPRT-208ENST00000485499 OR10D4PQ8NGN7 298 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 TIMM21Q9BVV7 248 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 NAT8Q9UHE5 227 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 V9GYV3 84 aa3.45□□□□□ -1.86
PTPRT-208ENST00000485499 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
PTPRT-208ENST00000485499 A0A1B0GW15 77 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 LINC00862A6NCI5 91 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.44□□□□□ -1.86
PTPRT-208ENST00000485499 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
PTPRT-208ENST00000485499 UBE2BP63146 152 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 MT1HP80294 61 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 PEA15Q15121 130 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 MRPL54Q6P161 138 aaKnown RBP3.44□□□□□ -1.86
PTPRT-208ENST00000485499 Q8NBF4 154 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
PTPRT-208ENST00000485499 D6R8Y8 96 aa3.43□□□□□ -1.86
PTPRT-208ENST00000485499 F8WDY8 70 aa3.43□□□□□ -1.86
PTPRT-208ENST00000485499 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
PTPRT-208ENST00000485499 PACRGQ96M98 296 aaPredicted RBP3.43□□□□□ -1.86
PTPRT-208ENST00000485499 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
PTPRT-208ENST00000485499 MRPL35Q9NZE8 188 aaKnown RBP3.43□□□□□ -1.86
PTPRT-208ENST00000485499 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 SMIM27A0A1W2PRY6 76 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 NPYP01303 97 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 PPBPP02775 128 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 RPL32P62910 135 aaKnown RBP3.42□□□□□ -1.86
PTPRT-208ENST00000485499 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 UNQ6190/PRO20217Q6UXQ8 127 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 Q6ZN92 141 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 PRELID3AQ96N28 172 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 C2orf88Q9BSF0 95 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
PTPRT-208ENST00000485499 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 IGHV3OR16-9A0A0B4J2B5 98 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 M0QXV9 152 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 CKS1BP61024 79 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
PTPRT-208ENST00000485499 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 TEX43Q6ZNM6 134 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 Q8N377 158 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 TMEM141Q96I45 108 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 MAP1LC3AQ9H492 121 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
PTPRT-208ENST00000485499 CARHSP1Q9Y2V2 147 aaKnown RBP3.41□□□□□ -1.86
PTPRT-208ENST00000485499 TRBV30A0A0K0K1B3 111 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 C6orf226Q5I0X4 101 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 C2orf82Q6UX34 121 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 VCX2Q9H322 139 aa3.4□□□□□ -1.87
PTPRT-208ENST00000485499 PPDPFQ9H3Y8 114 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms