RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 A0A1W2PNN7 141 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 GAGE2EQ4V326 116 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 C9orf116Q5BN46 136 aaPredicted RBP10.19□□□□□ -0.78
DDR1-246ENST00000485023 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 GAGE2DQ9UEU5 116 aa10.19□□□□□ -0.78
DDR1-246ENST00000485023 SMIM1B2RUZ4 78 aa10.18□□□□□ -0.78
DDR1-246ENST00000485023 Q6ZRP5 223 aa10.18□□□□□ -0.78
DDR1-246ENST00000485023 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
DDR1-246ENST00000485023 Q8IZM0 81 aa10.18□□□□□ -0.78
DDR1-246ENST00000485023 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
DDR1-246ENST00000485023 SCO1O75880 301 aa10.17□□□□□ -0.78
DDR1-246ENST00000485023 ATP5LO75964 103 aa10.17□□□□□ -0.78
DDR1-246ENST00000485023 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
DDR1-246ENST00000485023 FLG2Q5D862 2391 aaPredicted RBP10.17□□□□□ -0.78
DDR1-246ENST00000485023 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
DDR1-246ENST00000485023 FAM168BA1KXE4 195 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 COLCA2A8K830 154 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 HSBP1O75506 76 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 FAM19A2Q8N3H0 131 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 COX7B2Q8TF08 81 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.78
DDR1-246ENST00000485023 H3BRM9 83 aa10.14□□□□□ -0.79
DDR1-246ENST00000485023 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
DDR1-246ENST00000485023 NDUFC2-KCTD14E9PQ53 114 aa10.13□□□□□ -0.79
DDR1-246ENST00000485023 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
DDR1-246ENST00000485023 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
DDR1-246ENST00000485023 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
DDR1-246ENST00000485023 F8VRH5 84 aa10.12□□□□□ -0.79
DDR1-246ENST00000485023 SERF1AO75920 110 aa10.12□□□□□ -0.79
DDR1-246ENST00000485023 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
DDR1-246ENST00000485023 J3QL48 77 aa10.11□□□□□ -0.79
DDR1-246ENST00000485023 LINC00310P59036 64 aa10.11□□□□□ -0.79
DDR1-246ENST00000485023 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
DDR1-246ENST00000485023 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
DDR1-246ENST00000485023 CXCL5P42830 114 aa10.1□□□□□ -0.79
DDR1-246ENST00000485023 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
DDR1-246ENST00000485023 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
DDR1-246ENST00000485023 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
DDR1-246ENST00000485023 FAT3Q8TDW7 4589 aa10.09□□□□□ -0.79
DDR1-246ENST00000485023 H0Y8G0 127 aa10.09□□□□□ -0.79
DDR1-246ENST00000485023 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
DDR1-246ENST00000485023 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
DDR1-246ENST00000485023 NUPR1O60356 82 aa10.07□□□□□ -0.8
DDR1-246ENST00000485023 KRTAP7-1Q8IUC3 87 aa10.07□□□□□ -0.8
DDR1-246ENST00000485023 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
DDR1-246ENST00000485023 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
DDR1-246ENST00000485023 M0QXV9 152 aa10.06□□□□□ -0.8
DDR1-246ENST00000485023 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
DDR1-246ENST00000485023 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
DDR1-246ENST00000485023 FABP4P15090 132 aa10.05□□□□□ -0.8
DDR1-246ENST00000485023 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
DDR1-246ENST00000485023 PSORS1C2Q9UIG4 136 aa10.05□□□□□ -0.8
DDR1-246ENST00000485023 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
DDR1-246ENST00000485023 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
DDR1-246ENST00000485023 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
DDR1-246ENST00000485023 PFN2P35080 140 aa10.02□□□□□ -0.81
DDR1-246ENST00000485023 UBE2BP63146 152 aa10.02□□□□□ -0.81
DDR1-246ENST00000485023 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BKO60814 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 OXTP01178 125 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BJP06899 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BOP23527 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BBP33778 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BDP58876 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BCP62807 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 ODF1Q14990 250 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST2H2BEQ16778 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BHQ93079 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BNQ99877 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HIST1H2BMQ99879 126 aa10.01□□□□□ -0.81
DDR1-246ENST00000485023 HSPB8Q9UJY1 196 aa10□□□□□ -0.81
DDR1-246ENST00000485023 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
DDR1-246ENST00000485023 ERG28Q9UKR5 140 aa9.99□□□□□ -0.81
DDR1-246ENST00000485023 C22orf24Q9Y442 160 aa9.99□□□□□ -0.81
DDR1-246ENST00000485023 SPINK6Q6UWN8 80 aa9.97□□□□□ -0.81
DDR1-246ENST00000485023 A0A0U1RRA0 63 aa9.95□□□□□ -0.82
DDR1-246ENST00000485023 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDR1-246ENST00000485023 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
DDR1-246ENST00000485023 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
DDR1-246ENST00000485023 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
DDR1-246ENST00000485023 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
DDR1-246ENST00000485023 DPM2O94777 84 aa9.93□□□□□ -0.82
DDR1-246ENST00000485023 PLNP26678 52 aa9.93□□□□□ -0.82
DDR1-246ENST00000485023 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
DDR1-246ENST00000485023 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
DDR1-246ENST00000485023 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
DDR1-246ENST00000485023 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
DDR1-246ENST00000485023 LINC00158P58513 81 aa9.92□□□□□ -0.82
DDR1-246ENST00000485023 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
DDR1-246ENST00000485023 NKAPP1Q8N9T2 125 aa9.92□□□□□ -0.82
DDR1-246ENST00000485023 IGKCP01834 107 aa9.91□□□□□ -0.82
DDR1-246ENST00000485023 MT1HL1P0DM35 61 aa9.91□□□□□ -0.82
DDR1-246ENST00000485023 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
DDR1-246ENST00000485023 COX17Q14061 63 aa9.91□□□□□ -0.82
DDR1-246ENST00000485023 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms