RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 BAGE3Q86Y29 109 aa12.04□□□□□ -0.48
SNX17-206ENST00000484886 ATP5LO75964 103 aa12.03□□□□□ -0.48
SNX17-206ENST00000484886 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
SNX17-206ENST00000484886 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
SNX17-206ENST00000484886 CHCHD1Q96BP2 118 aaKnown RBP12.03□□□□□ -0.48
SNX17-206ENST00000484886 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
SNX17-206ENST00000484886 H3BRM9 83 aa12.02□□□□□ -0.49
SNX17-206ENST00000484886 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
SNX17-206ENST00000484886 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
SNX17-206ENST00000484886 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
SNX17-206ENST00000484886 Q6ZRP5 223 aa12.01□□□□□ -0.49
SNX17-206ENST00000484886 IGLV5-45A0A087WSX0 123 aa12□□□□□ -0.49
SNX17-206ENST00000484886 A0A1W2PNN7 141 aa12□□□□□ -0.49
SNX17-206ENST00000484886 TLX1NBP0CAT3 122 aa12□□□□□ -0.49
SNX17-206ENST00000484886 COX7B2Q8TF08 81 aa12□□□□□ -0.49
SNX17-206ENST00000484886 HSBP1O75506 76 aa11.99□□□□□ -0.49
SNX17-206ENST00000484886 IGLC3P0DOY3 106 aa11.99□□□□□ -0.49
SNX17-206ENST00000484886 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
SNX17-206ENST00000484886 F8VRH5 84 aa11.98□□□□□ -0.49
SNX17-206ENST00000484886 J3QL48 77 aa11.98□□□□□ -0.49
SNX17-206ENST00000484886 CXCL5P42830 114 aa11.98□□□□□ -0.49
SNX17-206ENST00000484886 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
SNX17-206ENST00000484886 COLCA2A8K830 154 aa11.97□□□□□ -0.49
SNX17-206ENST00000484886 PRR3P79522 188 aaKnown RBP11.96□□□□□ -0.49
SNX17-206ENST00000484886 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.49
SNX17-206ENST00000484886 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
SNX17-206ENST00000484886 SCO1O75880 301 aa11.95□□□□□ -0.5
SNX17-206ENST00000484886 FAM19A2Q8N3H0 131 aa11.95□□□□□ -0.5
SNX17-206ENST00000484886 IFI27L1Q96BM0 104 aa11.95□□□□□ -0.5
SNX17-206ENST00000484886 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
SNX17-206ENST00000484886 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
SNX17-206ENST00000484886 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
SNX17-206ENST00000484886 ZNF22P17026 224 aaPredicted RBP11.94□□□□□ -0.5
SNX17-206ENST00000484886 SERF1AO75920 110 aa11.93□□□□□ -0.5
SNX17-206ENST00000484886 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
SNX17-206ENST00000484886 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
SNX17-206ENST00000484886 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
SNX17-206ENST00000484886 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
SNX17-206ENST00000484886 H0Y8G0 127 aa11.9□□□□□ -0.5
SNX17-206ENST00000484886 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
SNX17-206ENST00000484886 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
SNX17-206ENST00000484886 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
SNX17-206ENST00000484886 M0QXV9 152 aa11.89□□□□□ -0.51
SNX17-206ENST00000484886 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
SNX17-206ENST00000484886 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
SNX17-206ENST00000484886 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
SNX17-206ENST00000484886 OXTP01178 125 aa11.88□□□□□ -0.51
SNX17-206ENST00000484886 LINC00310P59036 64 aa11.87□□□□□ -0.51
SNX17-206ENST00000484886 UBE2BP63146 152 aa11.86□□□□□ -0.51
SNX17-206ENST00000484886 PSORS1C2Q9UIG4 136 aa11.86□□□□□ -0.51
SNX17-206ENST00000484886 FABP4P15090 132 aa11.85□□□□□ -0.51
SNX17-206ENST00000484886 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
SNX17-206ENST00000484886 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
SNX17-206ENST00000484886 NUPR1O60356 82 aa11.84□□□□□ -0.51
SNX17-206ENST00000484886 KRTAP7-1Q8IUC3 87 aa11.84□□□□□ -0.51
SNX17-206ENST00000484886 PFN2P35080 140 aa11.83□□□□□ -0.52
SNX17-206ENST00000484886 SERTAD4-AS1Q5TG53 156 aa11.82□□□□□ -0.52
SNX17-206ENST00000484886 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
SNX17-206ENST00000484886 ZNF625Q96I27 306 aaPredicted RBP11.81□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BKO60814 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BJP06899 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BOP23527 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BBP33778 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BDP58876 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BCP62807 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 ODF1Q14990 250 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST2H2BEQ16778 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.8□□□□□ -0.52
SNX17-206ENST00000484886 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BHQ93079 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BNQ99877 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 HIST1H2BMQ99879 126 aa11.8□□□□□ -0.52
SNX17-206ENST00000484886 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SNX17-206ENST00000484886 C22orf24Q9Y442 160 aa11.79□□□□□ -0.52
SNX17-206ENST00000484886 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
SNX17-206ENST00000484886 KRTAP11-1Q8IUC1 163 aa11.78□□□□□ -0.52
SNX17-206ENST00000484886 LRP1Q07954 4544 aaKnown RBP11.77□□□□□ -0.52
SNX17-206ENST00000484886 PLNP26678 52 aa11.76□□□□□ -0.53
SNX17-206ENST00000484886 REG3GQ6UW15 175 aa11.76□□□□□ -0.53
SNX17-206ENST00000484886 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
SNX17-206ENST00000484886 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
SNX17-206ENST00000484886 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
SNX17-206ENST00000484886 SRSF9Q13242 221 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX17-206ENST00000484886 COX17Q14061 63 aa11.75□□□□□ -0.53
SNX17-206ENST00000484886 MRPL55Q7Z7F7 128 aaKnown RBP11.75□□□□□ -0.53
SNX17-206ENST00000484886 NKAPP1Q8N9T2 125 aa11.75□□□□□ -0.53
SNX17-206ENST00000484886 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
SNX17-206ENST00000484886 HERC1Q15751 4861 aa11.74□□□□□ -0.53
SNX17-206ENST00000484886 DPM2O94777 84 aa11.74□□□□□ -0.53
SNX17-206ENST00000484886 LINC00158P58513 81 aa11.74□□□□□ -0.53
SNX17-206ENST00000484886 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
SNX17-206ENST00000484886 SND1-IT1Q9HBX3 110 aa11.73□□□□□ -0.53
SNX17-206ENST00000484886 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
SNX17-206ENST00000484886 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
SNX17-206ENST00000484886 HERVK_113P61574 105 aa11.72□□□□□ -0.53
SNX17-206ENST00000484886 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
SNX17-206ENST00000484886 ATP6V1G1O75348 118 aa11.71□□□□□ -0.53
SNX17-206ENST00000484886 IGKCP01834 107 aa11.71□□□□□ -0.53
SNX17-206ENST00000484886 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms