RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, human

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-208	ENST00000484254	HNRNPA3	P51991	378 aa	Known RBP	13.87	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	PDZD11	Q5EBL8	140 aa		13.87	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	C6orf226	Q5I0X4	101 aa		13.87	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254		A0A1W2PNN7	141 aa		13.86	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254		Q6ZRP5	223 aa		13.86	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	CKS1B	P61024	79 aa		13.85	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	C9orf116	Q5BN46	136 aa	Predicted RBP	13.85	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.84	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.84	□□□□□ -0.19
CNTNAP3B-208	ENST00000484254	SMIM1	B2RUZ4	78 aa		13.83	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	ATP5L	O75964	103 aa		13.83	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	NDUFA6	P56556	154 aa		13.83	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	CHCHD1	Q96BP2	118 aa	Known RBP	13.83	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	PRR3	P79522	188 aa	Known RBP	13.82	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	NDUFC2-KCTD14	E9PQ53	114 aa		13.81	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	IGLC3	P0DOY3	106 aa		13.81	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	GAGE2E	Q4V326	116 aa		13.81	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	GAGE2D	Q9UEU5	116 aa		13.81	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	TRGC2	P03986	189 aa		13.8	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254		F8VRH5	84 aa		13.79	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254		J3QL48	77 aa		13.79	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	CXCL5	P42830	114 aa		13.79	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	COX7B2	Q8TF08	81 aa		13.79	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254		H3BRM9	83 aa		13.78	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	OXT	P01178	125 aa		13.78	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	SPINK8	P0C7L1	97 aa		13.78	□□□□□ -0.2
CNTNAP3B-208	ENST00000484254	COLCA2	A8K830	154 aa		13.77	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	HERC1	Q15751	4861 aa		13.77	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	BAGE3	Q86Y29	109 aa		13.77	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	FAM168B	A1KXE4	195 aa		13.76	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	PHF5A	Q7RTV0	110 aa	Known RBP	13.75	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	LRP1	Q07954	4544 aa	Known RBP	13.74	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	ZNF22	P17026	224 aa	Predicted RBP	13.74	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	FAT3	Q8TDW7	4589 aa		13.74	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	HSBP1	O75506	76 aa		13.73	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	C9orf129	Q5T035	196 aa	Known RBP	13.73	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.73	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	IGLV5-39	A0A0G2JS06	123 aa		13.72	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	IFI27L1	Q96BM0	104 aa		13.72	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	C11orf86	A6NJI1	115 aa		13.71	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	KRTAP7-1	Q8IUC3	87 aa		13.71	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.71	□□□□□ -0.21
CNTNAP3B-208	ENST00000484254	TRAV12-1	A0A0B4J245	112 aa		13.7	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	FAM19A2	Q8N3H0	131 aa		13.7	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	PSORS1C2	Q9UIG4	136 aa		13.69	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	SERF1A	O75920	110 aa		13.68	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	LINC00310	P59036	64 aa		13.68	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	TMEM170B	Q5T4T1	132 aa		13.67	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	XAGE1A	Q9HD64	81 aa		13.67	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254		M0QXV9	152 aa		13.66	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	SPINK6	Q6UWN8	80 aa		13.66	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	SCO1	O75880	301 aa		13.65	□□□□□ -0.22
CNTNAP3B-208	ENST00000484254	C1orf137	Q5JT78	98 aa		13.63	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	SERTAD4-AS1	Q5TG53	156 aa		13.63	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	KRTAP11-1	Q8IUC1	163 aa		13.63	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	NUPR1	O60356	82 aa		13.62	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	LEPROTL1	O95214	131 aa		13.62	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	TMEM223	A0PJW6	202 aa		13.6	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	UBE2B	P63146	152 aa		13.6	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	ODF1	Q14990	250 aa		13.6	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	C22orf24	Q9Y442	160 aa		13.6	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	SFTA2	Q6UW10	78 aa		13.59	□□□□□ -0.23
CNTNAP3B-208	ENST00000484254	MT1HL1	P0DM35	61 aa		13.58	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HSPB8	Q9UJY1	196 aa		13.58	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	PFN2	P35080	140 aa		13.57	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	LBH	Q53QV2	105 aa	Predicted RBP	13.57	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	TP73-AS1	Q9UF72	201 aa		13.57	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	ERG28	Q9UKR5	140 aa		13.57	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	PLA2G2D	Q9UNK4	145 aa		13.57	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254		H0Y8G0	127 aa		13.56	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	IGLV7-43	P04211	117 aa		13.56	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	REG3G	Q6UW15	175 aa		13.56	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	ZNF625	Q96I27	306 aa	Predicted RBP	13.56	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	FABP4	P15090	132 aa		13.55	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	COX17	Q14061	63 aa		13.55	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	LINC01600	Q96MT4	127 aa		13.55	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BK	O60814	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BJ	P06899	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BO	P23527	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BB	P33778	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BD	P58876	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BC	P62807	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST2H2BE	Q16778	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BH	Q93079	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BN	Q99877	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	HIST1H2BM	Q99879	126 aa		13.54	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	MRPL55	Q7Z7F7	128 aa	Known RBP	13.53	□□□□□ -0.24
CNTNAP3B-208	ENST00000484254	IGLV5-37	A0A075B6J1	123 aa		13.51	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	PLN	P26678	52 aa		13.5	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	SND1-IT1	Q9HBX3	110 aa		13.5	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	DIRC1	Q969H9	104 aa		13.49	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	LINC00167	Q96N53	147 aa		13.48	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	DPM2	O94777	84 aa		13.47	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	NKAPP1	Q8N9T2	125 aa		13.47	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254	MAP1LC3C	Q9BXW4	147 aa		13.47	□□□□□ -0.25
CNTNAP3B-208	ENST00000484254		H0Y9J4	135 aa		13.45	□□□□□ -0.26
CNTNAP3B-208	ENST00000484254	LINC00158	P58513	81 aa		13.45	□□□□□ -0.26
CNTNAP3B-208	ENST00000484254	PMCHL2	Q9BQD1	86 aa		13.45	□□□□□ -0.26

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