RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TCTE3Q8IZS6 198 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 LINC00862A6NCI5 91 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 PRSS2P07478 247 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 CKS2P33552 79 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 IFI27P40305 119 aaPredicted RBP6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 CTAG1AP78358 180 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 C6orf226Q5I0X4 101 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 LINC01561Q8N1V8 128 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 OSTCQ9NRP0 149 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 V9GYV3 84 aa6.15□□□□□ -1.42
SMARCC1-205ENST00000483847 NPYP01303 97 aa6.14□□□□□ -1.43
SMARCC1-205ENST00000483847 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
SMARCC1-205ENST00000483847 D6R8Y8 96 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 PRLHP81277 87 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 PNRC1Q12796 327 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 Q6ZN92 141 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 FP248Q71RG6 208 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 Q8IZM0 81 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 SMIM7Q9BQ49 75 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 ALKBH7Q9BT30 221 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 EIF5A2Q9GZV4 153 aaKnown RBP6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
SMARCC1-205ENST00000483847 F8VRH5 84 aa6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 SCO1O75880 301 aa6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 IFITM2Q01629 132 aa6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 TEX43Q6ZNM6 134 aa6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 NAT8BQ9UHF3 227 aa6.12□□□□□ -1.43
SMARCC1-205ENST00000483847 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
SMARCC1-205ENST00000483847 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
SMARCC1-205ENST00000483847 MT1HP80294 61 aa6.11□□□□□ -1.43
SMARCC1-205ENST00000483847 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
SMARCC1-205ENST00000483847 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
SMARCC1-205ENST00000483847 FAM74A3Q4VXF1 159 aa6.1□□□□□ -1.43
SMARCC1-205ENST00000483847 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
SMARCC1-205ENST00000483847 RAB5AP20339 215 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 AMELXQ99217 191 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 C2orf88Q9BSF0 95 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 CDKN2A-AS1Q9UH64 79 aa6.09□□□□□ -1.43
SMARCC1-205ENST00000483847 SMIM27A0A1W2PRY6 76 aa6.08□□□□□ -1.44
SMARCC1-205ENST00000483847 TMEM238C9JI98 176 aa6.08□□□□□ -1.44
SMARCC1-205ENST00000483847 FAM19A1Q7Z5A9 133 aa6.08□□□□□ -1.44
SMARCC1-205ENST00000483847 SLC51BQ86UW2 128 aa6.08□□□□□ -1.44
SMARCC1-205ENST00000483847 NKAPP1Q8N9T2 125 aa6.08□□□□□ -1.44
SMARCC1-205ENST00000483847 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 C2orf66Q6UXQ4 117 aa6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 DAND5Q8N907 189 aa6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 TMEM126AQ9H061 195 aa6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 VCX2Q9H322 139 aa6.07□□□□□ -1.44
SMARCC1-205ENST00000483847 A0A1B0GW15 77 aa6.06□□□□□ -1.44
SMARCC1-205ENST00000483847 RAB5BP61020 215 aa6.06□□□□□ -1.44
SMARCC1-205ENST00000483847 LOC389332A0A1B0GUA5 103 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 PPBPP02775 128 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 RPL23P62829 140 aaKnown RBP6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 CYSLTR1Q9Y271 337 aa6.05□□□□□ -1.44
SMARCC1-205ENST00000483847 IGIPA6NJ69 53 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 F8W036 122 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 M0R378 163 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 CFC1BP0CG36 223 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 CXCL5P42830 114 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 HERVK_113P63121 156 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 BLOC1S1P78537 153 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 ALKAL2Q6UX46 152 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 TMEM136Q6ZRR5 245 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 CBLN2Q8IUK8 224 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 ORMDL3Q8N138 153 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 Q8NBF4 154 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 SPRR4Q96PI1 79 aa6.04□□□□□ -1.44
SMARCC1-205ENST00000483847 RAB14P61106 215 aa6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 ADIRFQ15847 76 aa6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 XP32Q5T750 250 aa6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-205ENST00000483847 S100A8P05109 93 aa6.02□□□□□ -1.45
SMARCC1-205ENST00000483847 PRSS47A8MTI9 375 aa6.01□□□□□ -1.45
SMARCC1-205ENST00000483847 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
SMARCC1-205ENST00000483847 VPREB1P12018 145 aa6.01□□□□□ -1.45
SMARCC1-205ENST00000483847 Q8NDZ9 215 aa6.01□□□□□ -1.45
SMARCC1-205ENST00000483847 NPSP0C0P6 89 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 SEC11AP67812 179 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 PDZD11Q5EBL8 140 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 CLLU1Q5K131 121 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 Q8N8P6 123 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 MAP1LC3AQ9H492 121 aa6□□□□□ -1.45
SMARCC1-205ENST00000483847 SPINK1P00995 79 aa5.99□□□□□ -1.45
SMARCC1-205ENST00000483847 C9JQL5 133 aa5.98□□□□□ -1.45
SMARCC1-205ENST00000483847 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms