RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 CHCHD7Q9BUK0 85 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 SACSQ9NZJ4 4579 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 HYDINQ4G0P3 5121 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 A0A0J9YWU9 116 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 DEFB4AO15263 64 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
LIMK1-205ENST00000483414 COX6A2Q02221 97 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 LYRM9A8MSI8 78 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
LIMK1-205ENST00000483414 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 LINC00694P0DN24 101 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 M0QXV9 152 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
LIMK1-205ENST00000483414 A0A0B4J2C4 111 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 DEFB130BP0DP73 79 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 DEFB130AP0DP74 79 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 MIAQ16674 131 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 UBE2WQ96B02 151 aa6.72□□□□□ -1.33
LIMK1-205ENST00000483414 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.33
LIMK1-205ENST00000483414 A0A096LPF7 62 aa6.7□□□□□ -1.34
LIMK1-205ENST00000483414 FHL2Q14192 279 aa6.7□□□□□ -1.34
LIMK1-205ENST00000483414 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
LIMK1-205ENST00000483414 H7C423 109 aa6.7□□□□□ -1.34
LIMK1-205ENST00000483414 HERVK_113P63121 156 aa6.7□□□□□ -1.34
LIMK1-205ENST00000483414 LINC00158P58513 81 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 DNAJC30Q96LL9 226 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 K7EQD1 137 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 PFN2P35080 140 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 FAM104AQ969W3 186 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 TRBV10-2A0A0K0K1G8 114 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 LINC00242Q5T6M2 205 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 OR13C6PQ8NH95 151 aa6.69□□□□□ -1.34
LIMK1-205ENST00000483414 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
LIMK1-205ENST00000483414 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 SPART-AS1P0CW21 52 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 CLPSL2Q6UWE3 100 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 Q6ZTC4 211 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 C5orf38Q86SI9 138 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 NANOS2P60321 138 aaKnown RBP6.68□□□□□ -1.34
LIMK1-205ENST00000483414 LITAFQ99732 161 aa6.68□□□□□ -1.34
LIMK1-205ENST00000483414 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
LIMK1-205ENST00000483414 TENM2Q9NT68 2774 aa6.67□□□□□ -1.34
LIMK1-205ENST00000483414 NTM-AS1Q6ZSK4 140 aa6.67□□□□□ -1.34
LIMK1-205ENST00000483414 HTN3P15516 51 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 SMCR5Q8TEV8 140 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 C11orf45Q8TAV5 145 aa6.66□□□□□ -1.34
LIMK1-205ENST00000483414 NDUFA1O15239 70 aa6.65□□□□□ -1.34
LIMK1-205ENST00000483414 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.34
LIMK1-205ENST00000483414 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
LIMK1-205ENST00000483414 CYSTM1Q9H1C7 97 aa6.65□□□□□ -1.34
LIMK1-205ENST00000483414 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
LIMK1-205ENST00000483414 TIRAPP58753 221 aa6.65□□□□□ -1.35
LIMK1-205ENST00000483414 Q9HAA7 133 aa6.65□□□□□ -1.35
LIMK1-205ENST00000483414 RYR2Q92736 4967 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 PAX4O43316 350 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 TRBV6-4A0A1B0GX49 114 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 H3BNG1 76 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 C6orf226Q5I0X4 101 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
LIMK1-205ENST00000483414 DAD1P61803 113 aa6.63□□□□□ -1.35
LIMK1-205ENST00000483414 XCL1P47992 114 aa6.63□□□□□ -1.35
LIMK1-205ENST00000483414 CRPP02741 224 aa6.63□□□□□ -1.35
LIMK1-205ENST00000483414 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
LIMK1-205ENST00000483414 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 LST1O00453 97 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 DNAL4O96015 105 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 ATP5G1P05496 136 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 BAALC-AS2P0C853 105 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
LIMK1-205ENST00000483414 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 A0A087WVE0 104 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 hADV29S1A0JD25 119 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 H3BT86 120 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
LIMK1-205ENST00000483414 IGLV10-54A0A075B6I4 117 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 RYR3Q15413 4870 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 GYPEP15421 78 aa6.6□□□□□ -1.35
LIMK1-205ENST00000483414 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms