RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.57
CPNE1-224ENST00000483359 BIRC6Q9NR09 4857 aa11.52□□□□□ -0.57
CPNE1-224ENST00000483359 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
CPNE1-224ENST00000483359 NDUFA1O15239 70 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 DPM2O94777 84 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 UNQ6190/PRO20217Q6UXQ8 127 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 Q8IZM0 81 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 PLNP26678 52 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 COX7B2Q8TF08 81 aa11.5□□□□□ -0.57
CPNE1-224ENST00000483359 IGKCP01834 107 aa11.49□□□□□ -0.57
CPNE1-224ENST00000483359 CKS1BP61024 79 aa11.49□□□□□ -0.57
CPNE1-224ENST00000483359 PET117Q6UWS5 81 aa11.48□□□□□ -0.57
CPNE1-224ENST00000483359 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
CPNE1-224ENST00000483359 HAMPP81172 84 aa11.48□□□□□ -0.57
CPNE1-224ENST00000483359 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
CPNE1-224ENST00000483359 LINC01545Q5VT33 79 aa11.47□□□□□ -0.57
CPNE1-224ENST00000483359 FAM30AQ9NZY2 134 aa11.47□□□□□ -0.57
CPNE1-224ENST00000483359 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
CPNE1-224ENST00000483359 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
CPNE1-224ENST00000483359 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.57
CPNE1-224ENST00000483359 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.58
CPNE1-224ENST00000483359 LBHQ53QV2 105 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-224ENST00000483359 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
CPNE1-224ENST00000483359 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
CPNE1-224ENST00000483359 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-224ENST00000483359 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
CPNE1-224ENST00000483359 F8WDY8 70 aa11.43□□□□□ -0.58
CPNE1-224ENST00000483359 PANO1I0J062 215 aa11.43□□□□□ -0.58
CPNE1-224ENST00000483359 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
CPNE1-224ENST00000483359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-224ENST00000483359 C20orf202A1L168 122 aa11.43□□□□□ -0.58
CPNE1-224ENST00000483359 CXCL5P42830 114 aa11.43□□□□□ -0.58
CPNE1-224ENST00000483359 A0A096LNI7 61 aa11.42□□□□□ -0.58
CPNE1-224ENST00000483359 TRBV30A0A0K0K1B3 111 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 HERVK_113P61574 105 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 Q6ZSA8 131 aa11.41□□□□□ -0.58
CPNE1-224ENST00000483359 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
CPNE1-224ENST00000483359 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-224ENST00000483359 RNF151Q2KHN1 245 aa11.39□□□□□ -0.59
CPNE1-224ENST00000483359 STPG4Q8N801 248 aa11.39□□□□□ -0.59
CPNE1-224ENST00000483359 A0A1B0GV90 55 aa11.39□□□□□ -0.59
CPNE1-224ENST00000483359 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
CPNE1-224ENST00000483359 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
CPNE1-224ENST00000483359 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
CPNE1-224ENST00000483359 RYR1P21817 5038 aa11.38□□□□□ -0.59
CPNE1-224ENST00000483359 XGP55808 180 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 MAJINQ3KP22 176 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 Q6ZRP5 223 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 SCXQ7RTU7 201 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 PTTG1IPP53801 180 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 PKIGQ9Y2B9 76 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 HSPG2P98160 4391 aa11.37□□□□□ -0.59
CPNE1-224ENST00000483359 LEPROTO15243 131 aa11.36□□□□□ -0.59
CPNE1-224ENST00000483359 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
CPNE1-224ENST00000483359 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CPNE1-224ENST00000483359 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
CPNE1-224ENST00000483359 J3QQQ9 107 aa11.35□□□□□ -0.59
CPNE1-224ENST00000483359 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
CPNE1-224ENST00000483359 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
CPNE1-224ENST00000483359 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
CPNE1-224ENST00000483359 E9PLD3 99 aa11.34□□□□□ -0.59
CPNE1-224ENST00000483359 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
CPNE1-224ENST00000483359 PFN2P35080 140 aa11.34□□□□□ -0.59
CPNE1-224ENST00000483359 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
CPNE1-224ENST00000483359 LGALS3P17931 250 aaKnown RBP11.34□□□□□ -0.59
CPNE1-224ENST00000483359 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
CPNE1-224ENST00000483359 A0A087WYN8 130 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 ERG28Q9UKR5 140 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 A0A0U1RRA0 63 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 SFTA2Q6UW10 78 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
CPNE1-224ENST00000483359 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
CPNE1-224ENST00000483359 SMR3BP02814 79 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-224ENST00000483359 DDTP30046 118 aa11.3□□□□□ -0.6
CPNE1-224ENST00000483359 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
CPNE1-224ENST00000483359 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
CPNE1-224ENST00000483359 NMUP48645 174 aa11.29□□□□□ -0.6
CPNE1-224ENST00000483359 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
CPNE1-224ENST00000483359 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
CPNE1-224ENST00000483359 HERV-K104P63124 156 aa11.28□□□□□ -0.6
CPNE1-224ENST00000483359 PYY3Q5JQD4 70 aa11.28□□□□□ -0.6
CPNE1-224ENST00000483359 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
CPNE1-224ENST00000483359 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
CPNE1-224ENST00000483359 LINC00158P58513 81 aa11.27□□□□□ -0.61
CPNE1-224ENST00000483359 FAM19A5Q7Z5A7 132 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-224ENST00000483359 FAT1Q14517 4588 aa11.26□□□□□ -0.61
CPNE1-224ENST00000483359 PCP4P48539 62 aa11.26□□□□□ -0.61
CPNE1-224ENST00000483359 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
CPNE1-224ENST00000483359 COX17Q14061 63 aa11.25□□□□□ -0.61
CPNE1-224ENST00000483359 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms