RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CD164Q04900 197 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 Q6ZRP5 223 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 TMEM101Q96IK0 257 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 LINC00474Q9P2X8 69 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
CSDE1-206ENST00000483030 KCNRGQ8N5I3 272 aa4.56□□□□□ -1.68
CSDE1-206ENST00000483030 FAM213BQ8TBF2 198 aa4.56□□□□□ -1.68
CSDE1-206ENST00000483030 VAMP8Q9BV40 100 aa4.56□□□□□ -1.68
CSDE1-206ENST00000483030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-206ENST00000483030 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-206ENST00000483030 C9JAW5 83 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 F2Z2F3 143 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 TRGC1P0CF51 173 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 NTF3P20783 257 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 FOXI1Q12951 378 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 LYZL1Q6UWQ5 148 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 IMMP2LQ96T52 175 aa4.55□□□□□ -1.68
CSDE1-206ENST00000483030 C19orf71A6NCJ1 209 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 FAM231BA6NCW3 169 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 UMAD1C9J7I0 102 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 FGF6P10767 208 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 XCL1P47992 114 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 CENPWQ5EE01 88 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 SPANXDQ9BXN6 97 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 PKIGQ9Y2B9 76 aa4.54□□□□□ -1.68
CSDE1-206ENST00000483030 TRAV26-2A0A0B4J265 109 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 A6NDN8 102 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 VCYO14598 125 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 SPINK8P0C7L1 97 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 CCL20P78556 96 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 SYCNQ0VAF6 134 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 TWIST1Q15672 202 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 MRPL54Q6P161 138 aaKnown RBP4.53□□□□□ -1.68
CSDE1-206ENST00000483030 FAM231DQ6ZW35 169 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 C11orf52Q96A22 123 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 BORCS7Q96B45 105 aa4.53□□□□□ -1.68
CSDE1-206ENST00000483030 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
CSDE1-206ENST00000483030 LPAP08519 4548 aa4.53□□□□□ -1.69
CSDE1-206ENST00000483030 LINC00959A0A1B0GUT2 108 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 H7C423 109 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 TAX1BP3O14907 124 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 NCR2O95944 276 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 APCSP02743 223 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 ZNF345Q14585 488 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 PSORS1C2Q9UIG4 136 aa4.52□□□□□ -1.69
CSDE1-206ENST00000483030 LOC107984640A0A0U1RRK4 108 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 SDHAF1A6NFY7 115 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 ATP5LO75964 103 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 MT-ND6P03923 174 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 CTRLP40313 264 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 FOXA3P55318 350 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-206ENST00000483030 SS18Q15532 418 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 Q6Q795 121 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 PRR26Q8N8Z3 221 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 MANBALQ9NQG1 85 aa4.51□□□□□ -1.69
CSDE1-206ENST00000483030 TRBV20OR9-2A0A075B6H5 130 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 IGLV4-69A0A075B6H9 119 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 KANTRA0A1W2PQU2 76 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 I3L3M4 83 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 K7EP34 96 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-206ENST00000483030 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 Q6ZN92 141 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
CSDE1-206ENST00000483030 BCL2L11O43521 198 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 TRGC2P03986 189 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 BCL2P10415 239 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 GAGE2AQ6NT46 116 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 PHF5AQ7RTV0 110 aaKnown RBP4.49□□□□□ -1.69
CSDE1-206ENST00000483030 NUP35Q8NFH5 326 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 RNASE7Q9H1E1 156 aaKnown RBP4.49□□□□□ -1.69
CSDE1-206ENST00000483030 CDC42SE2Q9NRR3 84 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
CSDE1-206ENST00000483030 TRAV1-1A0A0B4J248 108 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 APOMO95445 188 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 TSHBP01222 138 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 DIRC1Q969H9 104 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 CAMK2N2Q96S95 79 aa4.48□□□□□ -1.69
CSDE1-206ENST00000483030 OPRPNQ99935 248 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-206ENST00000483030 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
CSDE1-206ENST00000483030 TRBV24-1A0A075B6N3 115 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 COX7A2LO14548 114 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 NDUFC2O95298 119 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 IGLV7-43P04211 117 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms